RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 GKN3PP0CG01 181 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 BMP2P12643 396 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 HOXB9P17482 250 aaPredicted RBP10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 CXCR1P25024 350 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 ATP5J2P56134 94 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 FAPQ12884 760 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 SLC17A1Q14916 467 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 LARS2Q15031 903 aaKnown RBP10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 GABRA6Q16445 453 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 C6orf10Q5SRN2 563 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 PRAMEF8Q5VWM4 474 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 PRAMEF7Q5VXH5 474 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 WBP2NLQ6ICG8 309 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 LSRQ86X29 649 aaPredicted RBP10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 MUS81Q96NY9 551 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 SPATA9Q9BWV2 254 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 BCL2L10Q9HD36 194 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 TCF7L2Q9NQB0 619 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 PARPBPQ9NWS1 579 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 SLC9A8Q9Y2E8 581 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 CHST2Q9Y4C5 530 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 PCDHB14Q9Y5E9 798 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 MAGED1Q9Y5V3 778 aaPredicted RBP10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 FLVCR1Q9Y5Y0 555 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 NAV3Q8IVL0 2385 aa10.4□□□□□ -0.74
SOX2-OT-201ENST00000460739 CADP27708 2225 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 USF3Q68DE3 2245 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 A0A1W2PP18 115 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 CIB4A0PJX0 185 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 TMEM247A6NEH6 219 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 LIPT2A6NK58 231 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 CCT8L1PA6NM43 557 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 SHISA9B4DS77 424 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 PDLIM1O00151 329 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 CLIC1O00299 241 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 ABCD4O14678 606 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 SMAD7O15105 426 aaKnown RBP10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 POLR3GO15318 223 aaPredicted RBP10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 GPIP06744 558 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 ITGA5P08648 1049 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 IDUAP35475 653 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 COPZ1P61923 177 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 FADDQ13158 208 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 RGNQ15493 299 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 ETFDHQ16134 617 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 PGGHGQ32M88 737 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 RPS26P11Q5JNZ5 115 aaPredicted RBP10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 OTUD3Q5T2D3 398 aaPredicted RBP10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 OR7E24Q6IFN5 339 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 SLC2A7Q6PXP3 512 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 CASP12Q6UXS9 341 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 CLIP4Q8N3C7 705 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 TMEM45BQ96B21 275 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 TRMT61AQ96FX7 289 aaKnown RBP10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 RADILQ96JH8 1075 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 SF3B5Q9BWJ5 86 aaKnown RBP10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 AMBRA1Q9C0C7 1298 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 GRIP2Q9C0E4 1043 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 RAD21L1Q9H4I0 556 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 PIF1Q9H611 641 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 ARMC7Q9H6L4 198 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 A4GALTQ9NPC4 353 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 CISD1Q9NZ45 108 aaKnown RBP10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 ZNF232Q9UNY5 417 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 IFT52Q9Y366 437 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 SLC25A15Q9Y619 301 aa10.39□□□□□ -0.75
SOX2-OT-201ENST00000460739 A0A096LPI6 279 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 AQP7P3A6NL99 342 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 A8MVM7 634 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 AKR7A3O95154 331 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 NUDT7P0C024 238 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 PRG2P13727 222 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 PTAFRP25105 342 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 IDH3AP50213 366 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 FOXG1P55316 489 aaPredicted RBP10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 STX1BP61266 288 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 CEACAM7Q14002 265 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 OR7A5Q15622 319 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 ZNF311Q5JNZ3 666 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 LRIF1Q5T3J3 769 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 C1QTNF12Q5T7M4 302 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 TSPO2Q5TGU0 170 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 BLOC1S3Q6QNY0 202 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 KLHL17Q6TDP4 642 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 TMEM108Q6UXF1 575 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 SERPINA11Q86U17 422 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 DTX2Q86UW9 622 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 FUNDC1Q8IVP5 155 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 MSRB3Q8IXL7 192 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 CADM2Q8N3J6 435 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 GOLGA6L1Q8N7Z2 621 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 TMEM99Q8N816 258 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 ZIC4Q8N9L1 334 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 C1orf162Q8NEQ5 155 aaPredicted RBP10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 OR9K2Q8NGE7 335 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 OR52E4Q8NGH9 312 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 OR52N5Q8NH56 324 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 LRRC8CQ8TDW0 803 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 SLC35B4Q969S0 331 aa10.38□□□□□ -0.75
SOX2-OT-201ENST00000460739 C3orf49Q96BT1 292 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms