RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 RASD2Q96D21 266 aa13□□□□□ -0.33
SCFD1-203ENST00000458591 BMFQ96LC9 184 aa13□□□□□ -0.33
SCFD1-203ENST00000458591 OR2M2Q96R28 347 aa13□□□□□ -0.33
SCFD1-203ENST00000458591 TCEAL2Q9H3H9 227 aaPredicted RBP13□□□□□ -0.33
SCFD1-203ENST00000458591 NOX4Q9NPH5 578 aa13□□□□□ -0.33
SCFD1-203ENST00000458591 GLTPQ9NZD2 209 aa13□□□□□ -0.33
SCFD1-203ENST00000458591 COQ3Q9NZJ6 369 aa13□□□□□ -0.33
SCFD1-203ENST00000458591 NUP50Q9UKX7 468 aa13□□□□□ -0.33
SCFD1-203ENST00000458591 RDH16O75452 317 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 ATP1B1P05026 303 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 TPOP07202 933 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 CELA2BP08218 269 aaPredicted RBP12.99□□□□□ -0.33
SCFD1-203ENST00000458591 H2AFB2P0C5Z0 115 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 PGDP52209 483 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 PSG6Q00889 435 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 FGFBP1Q14512 234 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 CDK5R1Q15078 307 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 COL28A1Q2UY09 1125 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 HSD17B12Q53GQ0 312 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 RTL4Q6ZR62 310 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 Q6ZTK2 550 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 SLC35F2Q8IXU6 374 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 CA13Q8N1Q1 262 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 ZNF680Q8NEM1 530 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 LRRC20Q8TCA0 184 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 SNX33Q8WV41 574 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 SCARF2Q96GP6 870 aaPredicted RBP12.99□□□□□ -0.33
SCFD1-203ENST00000458591 TSSK2Q96PF2 358 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 MYADMQ96S97 322 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 DUSP22Q9NRW4 184 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 DNAJB12Q9NXW2 375 aaKnown RBP12.99□□□□□ -0.33
SCFD1-203ENST00000458591 EIF3KQ9UBQ5 218 aaKnown RBP12.99□□□□□ -0.33
SCFD1-203ENST00000458591 SPEF1Q9Y4P9 236 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 HEBP2Q9Y5Z4 205 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 TGFBR3LH3BV60 316 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 GPR171O14626 319 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 FLRT2O43155 660 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 UBL3O95164 117 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 MPC2O95563 127 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 RAF1P04049 648 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 GDNFP39905 211 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 MAP3K8P41279 467 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 MMP15P51511 669 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 NANOS3P60323 173 aaKnown RBP12.99□□□□□ -0.33
SCFD1-203ENST00000458591 SIRPAP78324 504 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 SNTB2Q13425 540 aaKnown RBP12.99□□□□□ -0.33
SCFD1-203ENST00000458591 TRAM1Q15629 374 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 LINGO2Q7L985 606 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 UBE2Q1Q7Z7E8 422 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 OR6K6Q8NGW6 343 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 OMA1Q96E52 524 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 OR10A4Q9H209 315 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 INPP5EQ9NRR6 644 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 COPZ2Q9P299 210 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 KLK11Q9UBX7 282 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 CHRNA9Q9UGM1 479 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 RCE1Q9Y256 329 aa12.99□□□□□ -0.33
SCFD1-203ENST00000458591 A0A1B0GTH9 108 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 OR6C68A6NDL8 312 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 LINC01565O15544 149 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 SSNA1O43805 119 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 CFDP00746 253 aaPredicted RBP12.98□□□□□ -0.33
SCFD1-203ENST00000458591 ERVK-25P63136 954 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 CAMK2DQ13557 499 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 KLF9Q13886 244 aaPredicted RBP12.98□□□□□ -0.33
SCFD1-203ENST00000458591 ABHD13Q7L211 337 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 SLC38A6Q8IZM9 456 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 PIAS4Q8N2W9 510 aaPredicted RBP12.98□□□□□ -0.33
SCFD1-203ENST00000458591 GATSQ8NAP1 163 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 OR9A4Q8NGU2 314 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 SMIM19Q96E16 107 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 SPACA7Q96KW9 195 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 ZFYVE21Q9BQ24 234 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 CHIAQ9BZP6 476 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 TSPAN10Q9H1Z9 355 aaPredicted RBP12.98□□□□□ -0.33
SCFD1-203ENST00000458591 FAM60AQ9NP50 221 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 LRIT1Q9P2V4 623 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 TRIOO75962 3097 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 A0A1W2PQF6 199 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 C5orf67F2Z3F1 127 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 OGG1O15527 345 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 ZNF250P15622 560 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 CD53P19397 219 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 SLC6A6P31641 620 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 RPL4P36578 427 aaKnown RBP12.98□□□□□ -0.33
SCFD1-203ENST00000458591 PLA2G7Q13093 441 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 FCRLAQ7L513 359 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 HDDC2Q7Z4H3 204 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 CAMKVQ8NCB2 501 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 OR2T4Q8NH00 348 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 OR52I2Q8NH67 350 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 RELTQ969Z4 430 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 CLIP3Q96DZ5 547 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 LMF1Q96S06 567 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 CLEC4MQ9H2X3 399 aaPredicted RBP12.98□□□□□ -0.33
SCFD1-203ENST00000458591 NARFLQ9H6Q4 476 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 NCDNQ9UBB6 729 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 PCDHGA9Q9Y5G4 932 aaKnown RBP12.98□□□□□ -0.33
SCFD1-203ENST00000458591 AUP1Q9Y679 476 aa12.98□□□□□ -0.33
SCFD1-203ENST00000458591 SPTBP11277 2137 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms