RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 CASC10Q5T4H9 136 aa6.68□□□□□ -1.34
LINC01961-201ENST00000449954 TEDDM1Q5T9Z0 273 aa6.68□□□□□ -1.34
LINC01961-201ENST00000449954 ZNF620Q6ZNG0 422 aa6.68□□□□□ -1.34
LINC01961-201ENST00000449954 COMMD6Q7Z4G1 85 aa6.68□□□□□ -1.34
LINC01961-201ENST00000449954 CCDC170Q8IYT3 715 aa6.68□□□□□ -1.34
LINC01961-201ENST00000449954 METTL4Q8N3J2 472 aa6.68□□□□□ -1.34
LINC01961-201ENST00000449954 IL17RDQ8NFM7 739 aa6.68□□□□□ -1.34
LINC01961-201ENST00000449954 OR52E2Q8NGJ4 325 aa6.68□□□□□ -1.34
LINC01961-201ENST00000449954 OR4C3Q8NH37 302 aa6.68□□□□□ -1.34
LINC01961-201ENST00000449954 JADE3Q92613 823 aa6.68□□□□□ -1.34
LINC01961-201ENST00000449954 DYRK2Q92630 601 aa6.68□□□□□ -1.34
LINC01961-201ENST00000449954 KTI12Q96EK9 354 aaPredicted RBP6.68□□□□□ -1.34
LINC01961-201ENST00000449954 HES6Q96HZ4 224 aa6.68□□□□□ -1.34
LINC01961-201ENST00000449954 GAL3ST1Q99999 423 aa6.68□□□□□ -1.34
LINC01961-201ENST00000449954 NAT9Q9BTE0 207 aa6.68□□□□□ -1.34
LINC01961-201ENST00000449954 LMF2Q9BU23 707 aaKnown RBP6.68□□□□□ -1.34
LINC01961-201ENST00000449954 MRPL1Q9BYD6 325 aaKnown RBP6.68□□□□□ -1.34
LINC01961-201ENST00000449954 MRPL37Q9BZE1 423 aaKnown RBP6.68□□□□□ -1.34
LINC01961-201ENST00000449954 NOX4Q9NPH5 578 aa6.68□□□□□ -1.34
LINC01961-201ENST00000449954 PPANQ9NQ55 473 aaKnown RBP6.68□□□□□ -1.34
LINC01961-201ENST00000449954 NUDT4Q9NZJ9 180 aa6.68□□□□□ -1.34
LINC01961-201ENST00000449954 ZNF346Q9UL40 294 aaKnown RBP6.68□□□□□ -1.34
LINC01961-201ENST00000449954 SLC9A8Q9Y2E8 581 aa6.68□□□□□ -1.34
LINC01961-201ENST00000449954 ZKSCAN5Q9Y2L8 839 aa6.68□□□□□ -1.34
LINC01961-201ENST00000449954 WIPI2Q9Y4P8 454 aa6.68□□□□□ -1.34
LINC01961-201ENST00000449954 PCDHGB5Q9Y5G0 923 aa6.68□□□□□ -1.34
LINC01961-201ENST00000449954 SULT2B1O00204 365 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 SCDO00767 359 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 DNPH1O43598 174 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 TRAF3IP2O43734 574 aaPredicted RBP6.67□□□□□ -1.34
LINC01961-201ENST00000449954 PLATP00750 562 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 IGHMP01871 453 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 ZNF12P17014 697 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 PRKCAP17252 672 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 P2RX1P51575 399 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 TAS2R39P59534 338 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 ILF2Q12905 390 aaKnown RBP6.67□□□□□ -1.34
LINC01961-201ENST00000449954 OR4D1Q15615 310 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 SLC25A53Q5H9E4 307 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 TECRLQ5HYJ1 363 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 TSPO2Q5TGU0 170 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 TMPPEQ6ZT21 453 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 MTERF4Q7Z6M4 381 aaKnown RBP6.67□□□□□ -1.34
LINC01961-201ENST00000449954 POMGNT2Q8NAT1 580 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 MAGEE2Q8TD90 523 aaPredicted RBP6.67□□□□□ -1.34
LINC01961-201ENST00000449954 RAB1CQ92928 201 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 TM4SF18Q96CE8 201 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 KLHDC3Q9BQ90 382 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 ASPNQ9BXN1 380 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 MARCH7Q9H992 704 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 UBQLN4Q9NRR5 601 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 SLC6A13Q9NSD5 602 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 DDX18Q9NVP1 670 aaKnown RBP6.67□□□□□ -1.34
LINC01961-201ENST00000449954 TMEM45AQ9NWC5 275 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 LEF1Q9UJU2 399 aaPredicted RBP6.67□□□□□ -1.34
LINC01961-201ENST00000449954 C19orf53Q9UNZ5 99 aaPredicted RBP6.67□□□□□ -1.34
LINC01961-201ENST00000449954 ACOT9Q9Y305 439 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 ANGPTL3Q9Y5C1 460 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 INSIG2Q9Y5U4 225 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 CSMD3Q7Z407 3707 aa6.67□□□□□ -1.34
LINC01961-201ENST00000449954 MDFIC2A0A1B0GVS7 189 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 ETV2O00321 342 aaPredicted RBP6.66□□□□□ -1.34
LINC01961-201ENST00000449954 IPO7O95373 1038 aaKnown RBP6.66□□□□□ -1.34
LINC01961-201ENST00000449954 H6PDO95479 791 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 ESRRBO95718 433 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 IGKV1D-16P01601 117 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 SFTPBP07988 381 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 CRYBB2P43320 205 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 ALDH3B1P43353 468 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 MAGEA8P43361 318 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 SLC12A2P55011 1212 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 RPS23P62266 143 aaKnown RBP6.66□□□□□ -1.34
LINC01961-201ENST00000449954 ZNF117Q03924 483 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 DCTN2Q13561 401 aaKnown RBP6.66□□□□□ -1.34
LINC01961-201ENST00000449954 CD226Q15762 336 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 PCGF3Q3KNV8 242 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 NRN1LQ496H8 165 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 VPS26BQ4G0F5 336 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 FOXB2Q5VYV0 432 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 Q6ZTK2 550 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 ZC3HC1Q86WB0 502 aaKnown RBP6.66□□□□□ -1.34
LINC01961-201ENST00000449954 OR2L13Q8N349 312 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 TEX9Q8N6V9 391 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 L3MBTL4Q8NA19 623 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 OR4S1Q8NGB4 309 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 OR1K1Q8NGR3 316 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 SLC25A43Q8WUT9 341 aaPredicted RBP6.66□□□□□ -1.34
LINC01961-201ENST00000449954 SSMEM1Q8WWF3 244 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 EXT2Q93063 718 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 MARS2Q96GW9 593 aaKnown RBP6.66□□□□□ -1.34
LINC01961-201ENST00000449954 DENND2DQ9H6A0 471 aaPredicted RBP6.66□□□□□ -1.34
LINC01961-201ENST00000449954 SEC61A2Q9H9S3 476 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 NOX3Q9HBY0 568 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 TNFRSF19Q9NS68 423 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 LMBRD1Q9NUN5 540 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 U3KQK5 164 aa6.66□□□□□ -1.34
LINC01961-201ENST00000449954 ARHGAP32A7KAX9 2087 aa6.65□□□□□ -1.34
LINC01961-201ENST00000449954 TRAV40A0A0B4J280 105 aa6.65□□□□□ -1.34
LINC01961-201ENST00000449954 IGHV1-69-2A0A0G2JMI3 117 aa6.65□□□□□ -1.34
LINC01961-201ENST00000449954 TRIM49D1C9J1S8 452 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms