RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 ACAA2P42765 397 aaKnown RBP13.49□□□□□ -0.25
CHD3-205ENST00000449744 PTH2RP49190 550 aa13.49□□□□□ -0.25
CHD3-205ENST00000449744 IRX1P78414 480 aaPredicted RBP13.49□□□□□ -0.25
CHD3-205ENST00000449744 H3F3AP84243 136 aa13.49□□□□□ -0.25
CHD3-205ENST00000449744 FAPQ12884 760 aa13.49□□□□□ -0.25
CHD3-205ENST00000449744 OR7A5Q15622 319 aa13.49□□□□□ -0.25
CHD3-205ENST00000449744 OTUD3Q5T2D3 398 aaPredicted RBP13.49□□□□□ -0.25
CHD3-205ENST00000449744 PRAMEF8Q5VWM4 474 aa13.49□□□□□ -0.25
CHD3-205ENST00000449744 PRAMEF7Q5VXH5 474 aa13.49□□□□□ -0.25
CHD3-205ENST00000449744 ADAM5Q6NVV9 412 aa13.49□□□□□ -0.25
CHD3-205ENST00000449744 PAQR6Q6TCH4 344 aa13.49□□□□□ -0.25
CHD3-205ENST00000449744 CASP12Q6UXS9 341 aa13.49□□□□□ -0.25
CHD3-205ENST00000449744 FUNDC1Q8IVP5 155 aa13.49□□□□□ -0.25
CHD3-205ENST00000449744 ZNF433Q8N7K0 673 aaPredicted RBP13.49□□□□□ -0.25
CHD3-205ENST00000449744 MAL2Q969L2 176 aa13.49□□□□□ -0.25
CHD3-205ENST00000449744 FBXW5Q969U6 566 aa13.49□□□□□ -0.25
CHD3-205ENST00000449744 Q96MF0 132 aa13.49□□□□□ -0.25
CHD3-205ENST00000449744 GSX2Q9BZM3 304 aa13.49□□□□□ -0.25
CHD3-205ENST00000449744 BCL2L10Q9HD36 194 aa13.49□□□□□ -0.25
CHD3-205ENST00000449744 UPB1Q9UBR1 384 aa13.49□□□□□ -0.25
CHD3-205ENST00000449744 OR5H1A6NKK0 313 aa13.48□□□□□ -0.25
CHD3-205ENST00000449744 A8MVM7 634 aa13.48□□□□□ -0.25
CHD3-205ENST00000449744 PGM3O95394 542 aa13.48□□□□□ -0.25
CHD3-205ENST00000449744 BMP2P12643 396 aa13.48□□□□□ -0.25
CHD3-205ENST00000449744 PRG2P13727 222 aa13.48□□□□□ -0.25
CHD3-205ENST00000449744 RPS4XP62701 263 aaKnown RBP13.48□□□□□ -0.25
CHD3-205ENST00000449744 BSPH1Q075Z2 132 aa13.48□□□□□ -0.25
CHD3-205ENST00000449744 CEACAM7Q14002 265 aa13.48□□□□□ -0.25
CHD3-205ENST00000449744 SQLEQ14534 574 aa13.48□□□□□ -0.25
CHD3-205ENST00000449744 AGKQ53H12 422 aa13.48□□□□□ -0.25
CHD3-205ENST00000449744 LRIF1Q5T3J3 769 aa13.48□□□□□ -0.25
CHD3-205ENST00000449744 GCNT6Q5T4J0 391 aa13.48□□□□□ -0.25
CHD3-205ENST00000449744 SERPINA11Q86U17 422 aa13.48□□□□□ -0.25
CHD3-205ENST00000449744 BDH2Q9BUT1 245 aa13.48□□□□□ -0.25
CHD3-205ENST00000449744 RABEP2Q9H5N1 569 aa13.48□□□□□ -0.25
CHD3-205ENST00000449744 TMEM45AQ9NWC5 275 aa13.48□□□□□ -0.25
CHD3-205ENST00000449744 TAS2R16Q9NYV7 291 aa13.48□□□□□ -0.25
CHD3-205ENST00000449744 LAMP3Q9UQV4 416 aa13.48□□□□□ -0.25
CHD3-205ENST00000449744 NF1P21359 2839 aa13.48□□□□□ -0.25
CHD3-205ENST00000449744 ACANP16112 2415 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 DPRXA6NFQ7 191 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 LIPT2A6NK58 231 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 FAM171A2A8MVW0 826 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 AKR7A3O95154 331 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 HOXB9P17482 250 aaPredicted RBP13.47□□□□□ -0.25
CHD3-205ENST00000449744 ATP4BP51164 291 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 BNIP2Q12982 314 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 SLC17A1Q14916 467 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 PAGE3Q5JUK9 113 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 TMEM225Q6GV28 225 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 ATG4DQ86TL0 474 aaPredicted RBP13.47□□□□□ -0.25
CHD3-205ENST00000449744 TMEM99Q8N816 258 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 KBTBD8Q8NFY9 601 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 NFKBIDQ8NI38 313 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 MAGEB18Q96M61 343 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 SF3B5Q9BWJ5 86 aaKnown RBP13.47□□□□□ -0.25
CHD3-205ENST00000449744 VIPAS39Q9H9C1 493 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 ADPRHL2Q9NX46 363 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 SLC25A37Q9NYZ2 338 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 SLAMF8Q9P0V8 285 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 RPS6KB2Q9UBS0 482 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 MALT1Q9UDY8 824 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.47□□□□□ -0.25
CHD3-205ENST00000449744 CORO2BQ9UQ03 480 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 CHST2Q9Y4C5 530 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 FLVCR1Q9Y5Y0 555 aa13.47□□□□□ -0.25
CHD3-205ENST00000449744 ARID1AO14497 2285 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 A0A1W2PP18 115 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 EVPLLA8MZ36 301 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 H7C1Q1 480 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 ARAFP10398 606 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 ETS2P15036 469 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 NTF4P34130 210 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 ATP5J2P56134 94 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 CDK6Q00534 326 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 ZNF672Q499Z4 452 aaPredicted RBP13.46□□□□□ -0.25
CHD3-205ENST00000449744 C1orf140Q5VVS0 124 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 OR7E24Q6IFN5 339 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 KLHL17Q6TDP4 642 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 SEZ6L2Q6UXD5 910 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 AAED1Q7RTV5 226 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 GPAT4Q86UL3 456 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 LSRQ86X29 649 aaPredicted RBP13.46□□□□□ -0.25
CHD3-205ENST00000449744 KRT73Q86Y46 540 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 MSRB3Q8IXL7 192 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 OR52E4Q8NGH9 312 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 OR52N5Q8NH56 324 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 LILRB1Q8NHL6 650 aaPredicted RBP13.46□□□□□ -0.25
CHD3-205ENST00000449744 SMAP2Q8WU79 429 aaPredicted RBP13.46□□□□□ -0.25
CHD3-205ENST00000449744 CKAP2Q8WWK9 683 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 IGFBPL1Q8WX77 278 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 SLC35B4Q969S0 331 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 GTPBP3Q969Y2 492 aaKnown RBP13.46□□□□□ -0.25
CHD3-205ENST00000449744 C3orf49Q96BT1 292 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 THOC1Q96FV9 657 aaKnown RBP13.46□□□□□ -0.25
CHD3-205ENST00000449744 TRMT61AQ96FX7 289 aaKnown RBP13.46□□□□□ -0.25
CHD3-205ENST00000449744 SMR3AQ99954 134 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 SPATA5L1Q9BVQ7 753 aa13.46□□□□□ -0.25
CHD3-205ENST00000449744 ZNF701Q9NV72 531 aaPredicted RBP13.46□□□□□ -0.25
CHD3-205ENST00000449744 VAPAQ9P0L0 249 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms