RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 DDX18Q9NVP1 670 aaKnown RBP10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 NMRK1Q9NWW6 199 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 OPN4Q9UHM6 478 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 KLHL21Q9UJP4 597 aa10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.83□□□□□ -0.68
AC004540.1-204ENST00000449537 SLC22A31A6NKX4 558 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 SCDO00767 359 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 PIP5K1BO14986 540 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 SLITRK5O94991 958 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 CHEK2O96017 543 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 IL3P08700 152 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 LOXL3P58215 753 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 CHI3L2Q15782 390 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 BEAN1Q3B7T3 259 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 UNC50Q53HI1 259 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 ZNF362Q5T0B9 420 aaPredicted RBP10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 C16orf87Q6PH81 154 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 TMEM107Q6UX40 140 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 GPRIN3Q6ZVF9 776 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 SPATC1Q76KD6 591 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 CDK20Q8IZL9 346 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 C1orf52Q8N6N3 182 aaKnown RBP10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 CCNYL1Q8N7R7 359 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 C7orf26Q96N11 449 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 GATA5Q9BWX5 397 aaPredicted RBP10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 RASSF4Q9H2L5 321 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 MS4A5Q9H3V2 200 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 ELOVL6Q9H5J4 265 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 ZNF275Q9NSD4 429 aaPredicted RBP10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 THAP1Q9NVV9 213 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 REV1Q9UBZ9 1251 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 HAO1Q9UJM8 370 aa10.82□□□□□ -0.68
AC004540.1-204ENST00000449537 ZNF716A6NP11 495 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 SULT2B1O00204 365 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 PSMG1O95456 288 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 HSPA4LO95757 839 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 HPXP02790 462 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 JUNP05412 331 aaKnown RBP10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 HSD3B1P14060 373 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 PRKCAP17252 672 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 CDH2P19022 906 aaPredicted RBP10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 HSD3B2P26439 372 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 MPGP29372 298 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 DIO1P49895 249 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 NCBP2P52298 156 aaKnown RBP eCLIP10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 ABCE1P61221 599 aaKnown RBP10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 CSNK2A1P68400 391 aaPredicted RBP10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 HGFACQ04756 655 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 TRAF3Q13114 568 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 STX3Q13277 289 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 HEPACAMQ14CZ8 416 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 CD226Q15762 336 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 TOMM34Q15785 309 aaPredicted RBP10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 TAF9Q16594 264 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 HIKESHIQ53FT3 197 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 TMPPEQ6ZT21 453 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 OR2L13Q8N349 312 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 SLC16A11Q8NCK7 471 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 OR4F5Q8NH21 305 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 FAM110DQ8TAY7 271 aaPredicted RBP10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 PHOSPHO1Q8TCT1 267 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 MRAPQ8TCY5 172 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 RAB39BQ96DA2 213 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 ARL5BQ96KC2 179 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 SIKE1Q9BRV8 207 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 MECRQ9BV79 373 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 ZNF416Q9BWM5 594 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 SLC7A10Q9NS82 523 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 PARPBPQ9NWS1 579 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 ZNF69Q9UC07 566 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 NUP50Q9UKX7 468 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 SNX6Q9UNH7 406 aa10.81□□□□□ -0.68
AC004540.1-204ENST00000449537 LOC100653049A0A140TA62 436 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 A0A1W2PQD3 144 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 MYO1GB0I1T2 1018 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 OR7A17O14581 309 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 SNNO75324 88 aaPredicted RBP10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 CRCPO75575 148 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 KRT34O76011 436 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 KRT6AP02538 564 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 KRT6BP04259 564 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 CECR9P0C854 216 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 TCN1P20061 433 aaPredicted RBP10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 BGNP21810 368 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 CALCRP30988 508 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 LCN1P31025 176 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 KRT6CP48668 564 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 P2RX1P51575 399 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 POU3F1Q03052 451 aaPredicted RBP10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 ZNF117Q03924 483 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 BST1Q10588 318 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 FAM189A2Q15884 450 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 VPS26BQ4G0F5 336 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 OLFML2AQ68BL7 652 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 REP15Q6BDI9 236 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 ABLIM2Q6H8Q1 611 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 CBLN3Q6UW01 205 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 CASP12Q6UXS9 341 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 ZAR1Q86SH2 424 aa10.8□□□□□ -0.68
AC004540.1-204ENST00000449537 BCL6BQ8N143 479 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms