RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 EPYCQ99645 322 aa11.71□□□□□ -0.53
ERGIC3-209ENST00000447986 WFDC6Q9BQY6 131 aa11.71□□□□□ -0.53
ERGIC3-209ENST00000447986 NAA11Q9BSU3 229 aaPredicted RBP11.71□□□□□ -0.53
ERGIC3-209ENST00000447986 SRXN1Q9BYN0 137 aa11.71□□□□□ -0.53
ERGIC3-209ENST00000447986 KCNJ16Q9NPI9 418 aa11.71□□□□□ -0.53
ERGIC3-209ENST00000447986 DCAF13Q9NV06 445 aaKnown RBP11.71□□□□□ -0.53
ERGIC3-209ENST00000447986 A0A087WUJ7 227 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 TMEM229AB2RXF0 380 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 ARPC2O15144 300 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 OR2T1O43869 369 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 TPST2O60704 377 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 AQP8O94778 261 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 PRKD3O94806 890 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 RNF224P0DH78 156 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 TNFRSF1BP20333 461 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 GTF2E2P29084 291 aaKnown RBP11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 CDH12P55289 794 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 CTBP2P56545 445 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 OR2B6P58173 313 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 BNIP1Q12981 228 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 CEACAM7Q14002 265 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 NPTX1Q15818 432 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 C1orf140Q5VVS0 124 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 RBM45Q8IUH3 476 aaKnown RBP11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 CNEP1R1Q8N9A8 125 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 NAXEQ8NCW5 288 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 OR4D11Q8NGI4 311 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 RNF128Q8TEB7 428 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 ROBO4Q8WZ75 1007 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 MPP4Q96JB8 637 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 BTBD10Q9BSF8 475 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 TACO1Q9BSH4 297 aaKnown RBP11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 THTPAQ9BU02 230 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 GP6Q9HCN6 339 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 KLHL9Q9P2J3 617 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 EMC9Q9Y3B6 208 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 KLF2Q9Y5W3 355 aaPredicted RBP11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 RELNP78509 3460 aa11.71□□□□□ -0.54
ERGIC3-209ENST00000447986 MYO18BQ8IUG5 2567 aa11.7□□□□□ -0.54
ERGIC3-209ENST00000447986 ZC3H12DA2A288 527 aaKnown RBP11.7□□□□□ -0.54
ERGIC3-209ENST00000447986 FAM90A27PA6NNH2 459 aa11.7□□□□□ -0.54
ERGIC3-209ENST00000447986 ICMTO60725 284 aa11.7□□□□□ -0.54
ERGIC3-209ENST00000447986 THRBP10828 461 aa11.7□□□□□ -0.54
ERGIC3-209ENST00000447986 MSX2P35548 267 aaPredicted RBP11.7□□□□□ -0.54
ERGIC3-209ENST00000447986 CBX1P83916 185 aa11.7□□□□□ -0.54
ERGIC3-209ENST00000447986 TMEM201Q5SNT2 666 aa11.7□□□□□ -0.54
ERGIC3-209ENST00000447986 TTC33Q6PID6 262 aaPredicted RBP11.7□□□□□ -0.54
ERGIC3-209ENST00000447986 FAM214BQ7L5A3 538 aa11.7□□□□□ -0.54
ERGIC3-209ENST00000447986 VTCN1Q7Z7D3 282 aa11.7□□□□□ -0.54
ERGIC3-209ENST00000447986 POP5Q969H6 163 aaKnown RBP11.7□□□□□ -0.54
ERGIC3-209ENST00000447986 DNAJA3Q96EY1 480 aa11.7□□□□□ -0.54
ERGIC3-209ENST00000447986 PIGMQ9H3S5 423 aa11.7□□□□□ -0.54
ERGIC3-209ENST00000447986 ACTR3BQ9P1U1 418 aa11.7□□□□□ -0.54
ERGIC3-209ENST00000447986 SLC7A7Q9UM01 511 aa11.7□□□□□ -0.54
ERGIC3-209ENST00000447986 PHF3Q92576 2039 aaKnown RBP11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 MED12Q93074 2177 aa11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 HIVEP3Q5T1R4 2406 aa11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 A0A1W2PNV4 684 aa11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 A1L4Q6 167 aa11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 OR5F1O95221 314 aa11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 FPR1P21462 350 aa11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 AGFG1P52594 562 aaKnown RBP11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 ST3GAL3Q11203 375 aa11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 FOXF2Q12947 444 aa11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 TRIM25Q14258 630 aaKnown RBP11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 OR7A5Q15622 319 aa11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 MTX3Q5HYI7 312 aa11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 FAM69AQ5T7M9 428 aa11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 MAMDC2Q7Z304 686 aaPredicted RBP11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 CYP4Z1Q86W10 505 aa11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 MFSD8Q8NHS3 518 aa11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 PIGXQ8TBF5 258 aa11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 MCUR1Q96AQ8 359 aa11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 SLC41A3Q96GZ6 507 aa11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 PRRC1Q96M27 445 aa11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 TMEM43Q9BTV4 400 aa11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 CHST11Q9NPF2 352 aa11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 FAM32AQ9Y421 112 aaKnown RBP11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 FASNP49327 2511 aaKnown RBP11.69□□□□□ -0.54
ERGIC3-209ENST00000447986 MYO7BQ6PIF6 2116 aa11.68□□□□□ -0.54
ERGIC3-209ENST00000447986 HELZ2Q9BYK8 2649 aaKnown RBP11.68□□□□□ -0.54
ERGIC3-209ENST00000447986 TRAV36DV7A0A075B6V5 113 aa11.68□□□□□ -0.54
ERGIC3-209ENST00000447986 IGHV3-15A0A0B4J1V0 119 aa11.68□□□□□ -0.54
ERGIC3-209ENST00000447986 LIPT2A6NK58 231 aa11.68□□□□□ -0.54
ERGIC3-209ENST00000447986 EEF1E1-BLOC1S5C9J1V9 151 aa11.68□□□□□ -0.54
ERGIC3-209ENST00000447986 PRSS44E7EML9 344 aa11.68□□□□□ -0.54
ERGIC3-209ENST00000447986 SMAD9O15198 467 aaKnown RBP11.68□□□□□ -0.54
ERGIC3-209ENST00000447986 EEF1E1O43324 174 aaKnown RBP11.68□□□□□ -0.54
ERGIC3-209ENST00000447986 CYTIPO60759 359 aa11.68□□□□□ -0.54
ERGIC3-209ENST00000447986 SS18L1O75177 396 aaPredicted RBP11.68□□□□□ -0.54
ERGIC3-209ENST00000447986 NPIPB7O75200 414 aa11.68□□□□□ -0.54
ERGIC3-209ENST00000447986 DNAJC8O75937 253 aaPredicted RBP11.68□□□□□ -0.54
ERGIC3-209ENST00000447986 PDE5AO76074 875 aa11.68□□□□□ -0.54
ERGIC3-209ENST00000447986 IMPDH2P12268 514 aa11.68□□□□□ -0.54
ERGIC3-209ENST00000447986 ITGA2P17301 1181 aa11.68□□□□□ -0.54
ERGIC3-209ENST00000447986 RPS5P46782 204 aaKnown RBP11.68□□□□□ -0.54
ERGIC3-209ENST00000447986 SIRPAP78324 504 aa11.68□□□□□ -0.54
ERGIC3-209ENST00000447986 RASGEF1BQ0VAM2 473 aa11.68□□□□□ -0.54
ERGIC3-209ENST00000447986 PIN1Q13526 163 aaPredicted RBP11.68□□□□□ -0.54
ERGIC3-209ENST00000447986 MFSD13AQ14CX5 517 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms