RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 CLEC18CQ8NCF0 446 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 LILRB4Q8NHJ6 448 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 ROBO4Q8WZ75 1007 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 CCDC124Q96CT7 223 aaKnown RBP12.63□□□□□ -0.39
SSBP3-208ENST00000444533 ASB9Q96DX5 294 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 SLC41A3Q96GZ6 507 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 ARL5BQ96KC2 179 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 PRRC1Q96M27 445 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 FNDC11Q9BVV2 318 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 PRR14Q9BWN1 585 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 KLHL4Q9C0H6 718 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 PIGMQ9H3S5 423 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 COQ10BQ9H8M1 238 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 RNF122Q9H9V4 155 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 GP6Q9HCN6 339 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 EMC3Q9P0I2 261 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 FASNP49327 2511 aaKnown RBP12.63□□□□□ -0.39
SSBP3-208ENST00000444533 UBR5O95071 2799 aaPredicted RBP12.63□□□□□ -0.39
SSBP3-208ENST00000444533 PHF3Q92576 2039 aaKnown RBP12.62□□□□□ -0.39
SSBP3-208ENST00000444533 DIDO1Q9BTC0 2240 aaKnown RBP12.62□□□□□ -0.39
SSBP3-208ENST00000444533 HIVEP3Q5T1R4 2406 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 TRAV36DV7A0A075B6V5 113 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 FAM90A27PA6NNH2 459 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 EEF1E1-BLOC1S5C9J1V9 151 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 EEF1E1O43324 174 aaKnown RBP12.62□□□□□ -0.39
SSBP3-208ENST00000444533 TNFRSF1BP20333 461 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 FPR1P21462 350 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 RASGEF1BQ0VAM2 473 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 NPTX1Q15818 432 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 FXNQ16595 210 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 FAM69AQ5T7M9 428 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 SEM1Q6ZVN7 128 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 RRM2BQ7LG56 351 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 STK32CQ86UX6 486 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 RBM45Q8IUH3 476 aaKnown RBP12.62□□□□□ -0.39
SSBP3-208ENST00000444533 MFSD8Q8NHS3 518 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 SLC25A36Q96CQ1 311 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 DNAJA3Q96EY1 480 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 PYURFQ96I23 114 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 HS6ST2Q96MM7 605 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 TMEM43Q9BTV4 400 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 SRXN1Q9BYN0 137 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 MMADHCQ9H3L0 296 aaPredicted RBP12.62□□□□□ -0.39
SSBP3-208ENST00000444533 CHST11Q9NPF2 352 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 RIMS3Q9UJD0 308 aa12.62□□□□□ -0.39
SSBP3-208ENST00000444533 HELZ2Q9BYK8 2649 aaKnown RBP12.61□□□□□ -0.39
SSBP3-208ENST00000444533 TMEM229AB2RXF0 380 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 GPR171O14626 319 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 TPST2O60704 377 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 SMNDC1O75940 238 aaKnown RBP eCLIP12.61□□□□□ -0.39
SSBP3-208ENST00000444533 AQP8O94778 261 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 TOXO94900 526 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 HIST1H2ABP04908 130 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 HOXB6P17509 224 aaKnown RBP12.61□□□□□ -0.39
SSBP3-208ENST00000444533 RBM34P42696 430 aaKnown RBP12.61□□□□□ -0.39
SSBP3-208ENST00000444533 RPS5P46782 204 aaKnown RBP12.61□□□□□ -0.39
SSBP3-208ENST00000444533 AGFG1P52594 562 aaKnown RBP12.61□□□□□ -0.39
SSBP3-208ENST00000444533 SMIM11AP58511 58 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 SIRPAP78324 504 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 IL1RL1Q01638 556 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 SRSF1Q07955 248 aaKnown RBP eCLIP12.61□□□□□ -0.39
SSBP3-208ENST00000444533 TRAP1Q12931 704 aaKnown RBP12.61□□□□□ -0.39
SSBP3-208ENST00000444533 TMEM225Q6GV28 225 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 PAQR6Q6TCH4 344 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 CYP2R1Q6VVX0 501 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 FAM214BQ7L5A3 538 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 HIST3H2AQ7L7L0 130 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 OR4D11Q8NGI4 311 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 RNF128Q8TEB7 428 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 HIST1H2ACQ93077 130 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 ASPNQ9BXN1 380 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 RSPO3Q9BXY4 272 aaPredicted RBP12.61□□□□□ -0.39
SSBP3-208ENST00000444533 SLC19A3Q9BZV2 496 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 KRCC1Q9NPI7 259 aaPredicted RBP12.61□□□□□ -0.39
SSBP3-208ENST00000444533 PROCRQ9UNN8 238 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 KLF2Q9Y5W3 355 aaPredicted RBP12.61□□□□□ -0.39
SSBP3-208ENST00000444533 V9GYQ6 96 aa12.61□□□□□ -0.39
SSBP3-208ENST00000444533 ARHGAP21Q5T5U3 1957 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 IGHV3-15A0A0B4J1V0 119 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 A0A1W2PNV4 684 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 ZC3H12DA2A288 527 aaKnown RBP12.6□□□□□ -0.39
SSBP3-208ENST00000444533 LIPT2A6NK58 231 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 KDM4EB2RXH2 506 aaPredicted RBP12.6□□□□□ -0.39
SSBP3-208ENST00000444533 PRSS44E7EML9 344 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 CYTIPO60759 359 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 VAMP5O95183 116 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 MT-ATP6P00846 226 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 YES1P07947 543 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 NQO1P15559 274 aaKnown RBP12.6□□□□□ -0.39
SSBP3-208ENST00000444533 RHCEP18577 417 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 FOXD4Q12950 439 aaPredicted RBP12.6□□□□□ -0.39
SSBP3-208ENST00000444533 PIN1Q13526 163 aaPredicted RBP12.6□□□□□ -0.39
SSBP3-208ENST00000444533 TRAM2Q15035 370 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 FAM98BQ52LJ0 330 aaKnown RBP12.6□□□□□ -0.39
SSBP3-208ENST00000444533 OTUD3Q5T2D3 398 aaPredicted RBP12.6□□□□□ -0.39
SSBP3-208ENST00000444533 PLXDC2Q6UX71 529 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 MAMDC2Q7Z304 686 aaPredicted RBP12.6□□□□□ -0.39
SSBP3-208ENST00000444533 GDF7Q7Z4P5 450 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 CDK20Q8IZL9 346 aa12.6□□□□□ -0.39
SSBP3-208ENST00000444533 OR6K3Q8NGY3 331 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms