RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 ADAMTS16Q8TE57 1224 aa4.3□□□□□ -1.72
TM9SF3-202ENST00000443638 CACNG8Q8WXS5 425 aa4.3□□□□□ -1.72
TM9SF3-202ENST00000443638 UFD1Q92890 307 aa4.3□□□□□ -1.72
TM9SF3-202ENST00000443638 NAT6Q93015 286 aa4.3□□□□□ -1.72
TM9SF3-202ENST00000443638 MED30Q96HR3 178 aa4.3□□□□□ -1.72
TM9SF3-202ENST00000443638 TBX15Q96SF7 602 aa4.3□□□□□ -1.72
TM9SF3-202ENST00000443638 CYP2S1Q96SQ9 504 aa4.3□□□□□ -1.72
TM9SF3-202ENST00000443638 FAIM2Q9BWQ8 316 aa4.3□□□□□ -1.72
TM9SF3-202ENST00000443638 TM2D1Q9BX74 207 aa4.3□□□□□ -1.72
TM9SF3-202ENST00000443638 ELL3Q9HB65 397 aaPredicted RBP4.3□□□□□ -1.72
TM9SF3-202ENST00000443638 ADAP2Q9NPF8 381 aa4.3□□□□□ -1.72
TM9SF3-202ENST00000443638 TMEM181Q9P2C4 612 aa4.3□□□□□ -1.72
TM9SF3-202ENST00000443638 SAMD4AQ9UPU9 718 aaKnown RBP4.3□□□□□ -1.72
TM9SF3-202ENST00000443638 LOC100131303A0A0U1RQF7 123 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 A0A1B0GUV1 79 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 NDUFAB1O14561 156 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 AIREO43918 545 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 FGF17O60258 216 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 YEATS4O95619 227 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 PIGRP01833 764 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 ALDOBP05062 364 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 CD55P08174 381 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 MYL2P10916 166 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 NPR2P20594 1047 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 ZNF10P21506 573 aaPredicted RBP4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 IDSP22304 550 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 IFNA8P32881 189 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 UGT1A3P35503 534 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 TIMP3P35625 211 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 MMP12P39900 470 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 YAP1P46937 504 aaKnown RBP4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 ARRB1P49407 418 aaPredicted RBP4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 KPNA2P52292 529 aaKnown RBP4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 LINC01547P58512 204 aaPredicted RBP4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 GNMTQ14749 295 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 HLA-BQ31612 363 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 OR2G6Q5TZ20 316 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 GPR157Q5UAW9 335 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 REP15Q6BDI9 236 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 SYCE2Q6PIF2 218 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 C6orf89Q6UWU4 347 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 ASCL5Q7RTU5 278 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 FAM122BQ7Z309 247 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 C1QL2Q7Z5L3 287 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 CMTM8Q8IZV2 173 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 IQCKQ8N0W5 287 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 OR10V1Q8NGI7 309 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 MCHR1Q99705 422 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 ATP5SQ99766 215 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 REEP4Q9H6H4 257 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 RANBP3Q9H6Z4 567 aaPredicted RBP4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 MOB1AQ9H8S9 216 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 PRSS16Q9NQE7 514 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 ADAM22Q9P0K1 906 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 MYEF2Q9P2K5 600 aaKnown RBP4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 CTSFQ9UBX1 484 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 RIMS3Q9UJD0 308 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 C15orf41Q9Y2V0 281 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 L3MBTL1Q9Y468 752 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 USP6P35125 1406 aa4.29□□□□□ -1.72
TM9SF3-202ENST00000443638 IGHV3OR16-12A0A075B7B8 117 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 PRSS37A4D1T9 235 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 MPTX1A8MV57 137 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 BLOC1S5-TXNDC5H3BN57 136 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 NR5A2O00482 541 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 SH3BGRLO75368 114 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 ZNF254O75437 659 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 HOXD4P09016 255 aaPredicted RBP4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 SNRPCP09234 159 aaKnown RBP4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 UMPSP11172 480 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 PVRP15151 417 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 CFHR2P36980 270 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 NAA10P41227 235 aaPredicted RBP4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 SLC1A2P43004 574 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 CCNHP51946 323 aaPredicted RBP4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 MAP3K7CLP57077 242 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 FHL1Q13642 323 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 CCDC122Q5T0U0 273 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 CLEC6AQ6EIG7 209 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 SPSB3Q6PJ21 355 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 GDPD4Q6W3E5 623 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 PGAP1Q75T13 922 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 TIPARPQ7Z3E1 657 aaKnown RBP4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 GPR65Q8IYL9 337 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 ST13P4Q8IZP2 240 aaPredicted RBP4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 SVOPLQ8N434 492 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 CSNK1A1LQ8N752 337 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 FBXL13Q8NEE6 735 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 CLHC1Q8NHS4 586 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 LMO3Q8TAP4 145 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 TRUB1Q8WWH5 349 aaKnown RBP4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 HTR3CQ8WXA8 447 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 TMEM190Q8WZ59 177 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 C9orf85Q96MD7 179 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 XPO6Q96QU8 1125 aaKnown RBP4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 SLC29A1Q99808 456 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 ACBD6Q9BR61 282 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 CLEC7AQ9BXN2 247 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 HIPK2Q9H2X6 1198 aa4.28□□□□□ -1.72
TM9SF3-202ENST00000443638 ZNF385DQ9H6B1 395 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms