RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 ELOA3Q8NG57 546 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 OR6T1Q8NGN1 323 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 PIGXQ8TBF5 258 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 ABHD3Q8WU67 409 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 PSD2Q9BQI7 771 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 WFDC6Q9BQY6 131 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 NAA11Q9BSU3 229 aaPredicted RBP13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 RBM24Q9BX46 236 aaKnown RBP13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 POLR2J2Q9GZM3 115 aaKnown RBP13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 PCDHAC1Q9H158 963 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 POLR2J3Q9H1A7 115 aaKnown RBP13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 ELOVL5Q9NYP7 299 aa13.41□□□□□ -0.26
CSNK1E-210ENST00000442216 CACNA1DQ01668 2161 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 IGKV3D-15A0A087WSY6 115 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 A0A087WUJ7 227 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 M0R3H8 397 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 CXCR6O00574 342 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 GSTA4O15217 222 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 FZD7O75084 574 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 UQCRC1P31930 480 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 CPA2P48052 419 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 SLC16A1P53985 500 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 OR2B6P58173 313 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 SELENOWP63302 87 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 RASGEF1BQ0VAM2 473 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 BNIP2Q12982 314 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 SPATS1Q496A3 300 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 CYBRD1Q53TN4 286 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 C1orf140Q5VVS0 124 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 ZNF787Q6DD87 383 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 PAQR6Q6TCH4 344 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 C16orf89Q6UX73 402 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 LUZP2Q86TE4 346 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 MFSD8Q8NHS3 518 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 BCAS4Q8TDM0 211 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 LZICQ8WZA0 190 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 MARVELD3Q96A59 401 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 KCTD14Q9BQ13 255 aaPredicted RBP13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 TAPBPLQ9BX59 468 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 FANCFQ9NPI8 374 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 CLEC4AQ9UMR7 237 aa13.4□□□□□ -0.26
CSNK1E-210ENST00000442216 IGHV3-15A0A0B4J1V0 119 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 LIPT2A6NK58 231 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 GPR171O14626 319 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 CHP2O43745 196 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 OR2T1O43869 369 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 SMNDC1O75940 238 aaKnown RBP eCLIP13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 AHSA1O95433 338 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 FPR1P21462 350 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 EGR4Q05215 589 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 CEACAM7Q14002 265 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 NPTX1Q15818 432 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 LRRC23Q53EV4 343 aaPredicted RBP13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 ENTPD8Q5MY95 495 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 LINC00114Q6XXX2 140 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 BEND4Q6ZU67 534 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 STK32CQ86UX6 486 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 TUSC5Q8IXB3 177 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 OR6S1Q8NH40 331 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 NSL1Q96IY1 281 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 ADPRHL2Q9NX46 363 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 GALNT8Q9NY28 637 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 EMC3Q9P0I2 261 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 KCNN3Q9UGI6 736 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 ING1Q9UK53 422 aaPredicted RBP13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 SH3GLB1Q9Y371 365 aa13.39□□□□□ -0.27
CSNK1E-210ENST00000442216 TRAPPC13A5PLN9 417 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 ZNF716A6NP11 495 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 HSD17B1P14061 328 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 GGT1P19440 569 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 CALB2P22676 271 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 CD79BP40259 229 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 CDH12P55289 794 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 OR7A5Q15622 319 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 FXNQ16595 210 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 SAMD4BQ5PRF9 694 aaKnown RBP13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 FAM69AQ5T7M9 428 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 ZNF474Q6S9Z5 364 aaPredicted RBP13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 CBLL1Q75N03 491 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 CARM1Q86X55 608 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 ZNF610Q8N9Z0 462 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 OR4D11Q8NGI4 311 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 VANGL1Q8TAA9 524 aaPredicted RBP13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 ADAMTS16Q8TE57 1224 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 C14orf79Q96F83 325 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 MPP4Q96JB8 637 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 EPYCQ99645 322 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 TMEM43Q9BTV4 400 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 SF3B5Q9BWJ5 86 aaKnown RBP13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 PRR14Q9BWN1 585 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 OPN3Q9H1Y3 402 aaPredicted RBP13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 ADA2Q9NZK5 511 aa13.38□□□□□ -0.27
CSNK1E-210ENST00000442216 TRAV36DV7A0A075B6V5 113 aa13.37□□□□□ -0.27
CSNK1E-210ENST00000442216 AQP7P3A6NL99 342 aa13.37□□□□□ -0.27
CSNK1E-210ENST00000442216 FTCDNL1E5RQL4 147 aa13.37□□□□□ -0.27
CSNK1E-210ENST00000442216 VAMP5O95183 116 aa13.37□□□□□ -0.27
CSNK1E-210ENST00000442216 MXRA7P84157 204 aa13.37□□□□□ -0.27
CSNK1E-210ENST00000442216 SLC25A3Q00325 362 aa13.37□□□□□ -0.27
CSNK1E-210ENST00000442216 MFSD13AQ14CX5 517 aa13.37□□□□□ -0.27
CSNK1E-210ENST00000442216 OTUD3Q5T2D3 398 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms