RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 OR56A1Q8NGH5 318 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 ZMYND19Q96E35 227 aaPredicted RBP18.7■□□□□ 0.58
SHOX2-203ENST00000441443 LRIG1Q96JA1 1093 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 PRSS27Q9BQR3 290 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 FKRPQ9H9S5 495 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 SAGE1Q9NXZ1 904 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 HEATR5BQ9P2D3 2071 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 TRBV2A0A0J9YWF9 115 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 ANKRD20A5PA0PJZ0 165 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 LINC01387J3KSC0 135 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 KCNJ13O60928 360 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 LINC00271P0C7V0 271 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 PRKAR1BP31321 381 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 NAA10P41227 235 aaPredicted RBP18.7■□□□□ 0.58
SHOX2-203ENST00000441443 GPR1P46091 355 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 DLX5P56178 289 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 PRR5P85299 388 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 MC2RQ01718 297 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 UBXN2BQ14CS0 331 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 TMEM69Q5SWH9 247 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 TMEM64Q6YI46 380 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 SLC16A11Q8NCK7 471 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 NXPE3Q969Y0 559 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 SMIM19Q96E16 107 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 SLC35A4Q96G79 324 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 NRIP3Q9NQ35 241 aa18.7■□□□□ 0.58
SHOX2-203ENST00000441443 HMSDA8MTL9 139 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 P2RX1P51575 399 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 REEP5Q00765 189 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 CDK5R1Q15078 307 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 ZNF77Q15935 545 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 PUS10Q3MIT2 529 aaKnown RBP18.69■□□□□ 0.58
SHOX2-203ENST00000441443 FNDC3BQ53EP0 1204 aaKnown RBP18.69■□□□□ 0.58
SHOX2-203ENST00000441443 EIF4E3Q8N5X7 224 aaKnown RBP18.69■□□□□ 0.58
SHOX2-203ENST00000441443 OR10K1Q8NGX5 313 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 SYNPRQ8TBG9 265 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 OR52A5Q9H2C5 316 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 IFT22Q9H7X7 185 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 CLDND1Q9NY35 253 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 MAFFQ9ULX9 164 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 ZNF443Q9Y2A4 671 aaPredicted RBP18.69■□□□□ 0.58
SHOX2-203ENST00000441443 INSL6Q9Y581 213 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 GON4LQ3T8J9 2241 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 ITGA10O75578 1167 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 NDUFB6O95139 128 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 EGFP01133 1207 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 SRMP19623 302 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 SLC9A5Q14940 896 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 PXT1Q8NFP0 134 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 NKX6-2Q9C056 277 aaPredicted RBP18.69■□□□□ 0.58
SHOX2-203ENST00000441443 PELI2Q9HAT8 420 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 TAS2R3Q9NYW6 316 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 FBXL3Q9UKT7 428 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 KLF2Q9Y5W3 355 aaPredicted RBP18.69■□□□□ 0.58
SHOX2-203ENST00000441443 REV3LO60673 3130 aa18.69■□□□□ 0.58
SHOX2-203ENST00000441443 PPP1R3DO95685 299 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 ACHEP22303 614 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 SORDQ00796 357 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 ZNF836Q6ZNA1 936 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 MFFQ9GZY8 342 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 EPHX3Q9H6B9 360 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 KRCC1Q9NPI7 259 aaPredicted RBP18.68■□□□□ 0.58
SHOX2-203ENST00000441443 RIIAD1A6NNX1 92 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 SNRPGP15A8MWD9 76 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 ABCD4O14678 606 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 EMC8O43402 210 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 ERI3O43414 337 aaKnown RBP18.68■□□□□ 0.58
SHOX2-203ENST00000441443 MYOGP15173 224 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 EDNRAP25101 427 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 TMEM88Q6PEY1 159 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 LRRN1Q6UXK5 716 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 OVCH1Q7RTY7 1134 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 MCATQ8IVS2 390 aaKnown RBP18.68■□□□□ 0.58
SHOX2-203ENST00000441443 BPIFCQ8NFQ6 507 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 ADAMTS15Q8TE58 950 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 ASB12Q8WXK4 309 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 CDS1Q92903 461 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 DTD2Q96FN9 168 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 ZNF764Q96H86 408 aaPredicted RBP18.68■□□□□ 0.58
SHOX2-203ENST00000441443 GNG8Q9UK08 70 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 PLCL2Q9UPR0 1127 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 UBE2QL1A1L167 161 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 LRIT2A6NDA9 550 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 IFITM5A6NNB3 132 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 F5H5P2 479 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 PSMD9O00233 223 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 PIN1P1O15428 100 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 AIFM1O95831 613 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 CDK2P24941 298 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 DPP4P27487 766 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 SIRPAP78324 504 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 CBFBQ13951 182 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 PABPC1L2AQ5JQF8 200 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 FRRS1Q6ZNA5 592 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 DCUN1D3Q8IWE4 304 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 SFXN5Q8TD22 340 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 STK35Q8TDR2 534 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 CERS4Q9HA82 394 aa18.68■□□□□ 0.58
SHOX2-203ENST00000441443 ZMAT5Q9UDW3 170 aaKnown RBP18.68■□□□□ 0.58
SHOX2-203ENST00000441443 PRRT4C9JH25 899 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms