RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 TMEM160Q9NX00 188 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 GIN1Q9NXP7 522 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 NKX1-2Q9UD57 310 aaPredicted RBP4.31□□□□□ -1.72
PTPN4-206ENST00000441089 Q9UFV3 132 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 BCAP29Q9UHQ4 241 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 MAGEL2Q9UJ55 1249 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 FAF1Q9UNN5 650 aaPredicted RBP4.31□□□□□ -1.72
PTPN4-206ENST00000441089 PPIEQ9UNP9 301 aaKnown RBP4.31□□□□□ -1.72
PTPN4-206ENST00000441089 CORO2BQ9UQ03 480 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 V9GYQ6 96 aa4.31□□□□□ -1.72
PTPN4-206ENST00000441089 DSPPQ9NZW4 1301 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 NPIPA5A0A0B4J1W7 369 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 AQP12BA6NM10 295 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 NPIPA7E9PJI5 369 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 H0Y3Z8 333 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 M0QX08 132 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 ACOT7O00154 380 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 DVL2O14641 736 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 BCKDKO14874 412 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 CASKO14936 926 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 GSTA4O15217 222 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 NME2P1O60361 137 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 TPST1O60507 370 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 FCMRO60667 390 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 TMCC2O75069 709 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 WDR1O75083 606 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 COQ9O75208 318 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 BCAS1O75363 584 aaPredicted RBP4.3□□□□□ -1.72
PTPN4-206ENST00000441089 PRKD3O94806 890 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 SEC24DO94855 1032 aaPredicted RBP4.3□□□□□ -1.72
PTPN4-206ENST00000441089 SOX30O94993 753 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 MFN2O95140 757 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 PGM3O95394 542 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 H6PDO95479 791 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 ATP6V1G2O95670 118 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 SERPINA1P01009 418 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 MT-ND1P03886 318 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 CYC1P08574 325 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 ALOX5P09917 674 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 NPIPA8P0DM63 369 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 CT45A8P0DMV1 189 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 CT45A9P0DMV2 189 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 NR2F1P10589 423 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 GABRA3P34903 492 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 MAGEA8P43361 318 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 CLCN2P51788 898 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 SLC26A5P58743 744 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 KCNJ10P78508 379 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 OC90Q02509 493 aaPredicted RBP4.3□□□□□ -1.72
PTPN4-206ENST00000441089 BIKQ13323 160 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 FOXE3Q13461 319 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 TNK1Q13470 666 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 VEZF1Q14119 521 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 ETFDHQ16134 617 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 MAPK14Q16539 360 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 ARHGAP11BQ3KRB8 267 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 GXYLT1Q4G148 440 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 GLIPR1L2Q4G1C9 344 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 IQCCQ4KMZ1 466 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 LRRC23Q53EV4 343 aaPredicted RBP4.3□□□□□ -1.72
PTPN4-206ENST00000441089 CT45A2Q5DJT8 189 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 DCST2Q5T1A1 773 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 RIPPLY2Q5TAB7 128 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 SPINK14Q6IE38 97 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 TYW3Q6IPR3 259 aaKnown RBP4.3□□□□□ -1.72
PTPN4-206ENST00000441089 REEP3Q6NUK4 255 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 H3F3CQ6NXT2 135 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 ZCCHC12Q6PEW1 402 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 EIF3MQ7L2H7 374 aaKnown RBP4.3□□□□□ -1.72
PTPN4-206ENST00000441089 VTCN1Q7Z7D3 282 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 SPATA24Q86W54 205 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 AQP12AQ8IXF9 295 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 BEST3Q8N1M1 668 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 CDRT4Q8N9R6 151 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 MORN4Q8NDC4 146 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 B3GNT7Q8NFL0 401 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 OR7G1Q8NGA0 311 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 OR52E4Q8NGH9 312 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 OR4D11Q8NGI4 311 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 OR14A16Q8NHC5 309 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 SLC26A7Q8TE54 656 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 ADAMTS15Q8TE58 950 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 CANT1Q8WVQ1 401 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 FAM162AQ96A26 154 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 ZNF503Q96F45 646 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 IMMP1LQ96LU5 166 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 NSMCE2Q96MF7 247 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 GNRHR2Q96P88 292 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 BTBD9Q96Q07 612 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 STACQ99469 402 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 SDF2Q99470 211 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 WFDC6Q9BQY6 131 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 REG4Q9BYZ8 158 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 ZNF350Q9GZX5 532 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 SHARPINQ9H0F6 387 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 ZNF700Q9H0M5 742 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 NXF5Q9H1B4 397 aaKnown RBP4.3□□□□□ -1.72
PTPN4-206ENST00000441089 SLC38A1Q9H2H9 487 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 LIN28AQ9H9Z2 209 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms