RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 GPA33Q99795 319 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 TSSK6Q9BXA6 273 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 POLDIP3Q9BY77 421 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 TBL1XR1Q9BZK7 514 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 EXOSC3Q9NQT5 275 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 HPF1Q9NWY4 346 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 FLRT3Q9NZU0 649 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 PSORS1C1Q9UIG5 152 aa13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 GCN1Q92616 2671 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-204ENST00000440083 SNTNA6NMZ2 147 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 CLCA1A8K7I4 914 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 ZNF99A8MXY4 864 aaPredicted RBP13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 EFCAB9A8MZ26 197 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 H3BSA7 217 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 KLF4O43474 513 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 TSPAN2O60636 221 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 ICOSLGO75144 302 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 SP1P08047 785 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 FBXO45P0C2W1 286 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 CD46P15529 392 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 SLC6A8P48029 635 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 GIPRP48546 466 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 PNLIPRP2P54317 469 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 GPR85P60893 370 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 CDK5Q00535 292 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 PRKCDQ05655 676 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 EFR3AQ14156 821 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 INPP5JQ15735 1006 aaPredicted RBP13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 SNAPC1Q16533 368 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 ZNF791Q3KP31 576 aaPredicted RBP13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 TMEM201Q5SNT2 666 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 MEDAGQ5VYS4 303 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 DESI1Q6ICB0 168 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 B3GNT6Q6ZMB0 384 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 WDR88Q6ZMY6 472 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 GALNTL5Q7Z4T8 443 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 TCEANCQ8N8B7 351 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 POGLUT1Q8NBL1 392 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 FAM71CQ8NEG0 241 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 OR10G3Q8NGC4 313 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 OR13F1Q8NGS4 319 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 DNAJA4Q8WW22 397 aaPredicted RBP13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 NMD3Q96D46 503 aaKnown RBP13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 SNRNP40Q96DI7 357 aaKnown RBP13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 SPACA9Q96E40 222 aaPredicted RBP13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 TAAR6Q96RI8 345 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 CNOT2Q9NZN8 540 aaKnown RBP13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 DNAJC27Q9NZQ0 273 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 WARS2Q9UGM6 360 aaKnown RBP13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 PCDHGB1Q9Y5G3 927 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 SVILO95425 2214 aa13.22□□□□□ -0.29
TNFRSF1A-204ENST00000440083 A0A1W2PQD3 144 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 PINLYPA6NC86 204 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 NME2P1O60361 137 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 HCN1O60741 890 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 RCBTB2O95199 551 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 CDK1P06493 297 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 NGFRP08138 427 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 CCL3P10147 92 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 SAGP10523 405 aaPredicted RBP13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 BMP7P18075 431 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 NME2P22392 152 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 ABCD3P28288 659 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 RFC3P40938 356 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 CTBP2P56545 445 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 FBXW4P57775 412 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 CD226Q15762 336 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 IGFBP7Q16270 282 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 OCLNQ16625 522 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 TMEM44Q2T9K0 475 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 PGGHGQ32M88 737 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 FNDC7Q5VTL7 733 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 GPR107Q5VW38 600 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 XAF1Q6GPH4 301 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 WBP2NLQ6ICG8 309 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 SLC25A25Q6KCM7 469 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 OPN5Q6U736 354 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 OR2T33Q8NG76 320 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 OR8D4Q8NGM9 314 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 ZNF563Q8TA94 476 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 ZNF420Q8TAQ5 688 aaPredicted RBP13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 CPT1CQ8TCG5 803 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 GGHQ92820 318 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 BPIFA2Q96DR5 249 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 ARSGQ96EG1 525 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 MYCBPQ99417 103 aaPredicted RBP13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 RHNO1Q9BSD3 238 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 PLA2G12AQ9BZM1 189 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 LAT2Q9GZY6 243 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 DEPPQ9NTK1 212 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 ASF1BQ9NVP2 202 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 FKBP14Q9NWM8 211 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 PTTG2Q9NZH5 202 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 RPL36Q9Y3U8 105 aaKnown RBP13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 COMMD3-BMI1R4GMX3 469 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 EML6Q6ZMW3 1958 aa13.21□□□□□ -0.29
TNFRSF1A-204ENST00000440083 IRGMA1A4Y4 181 aa13.2□□□□□ -0.3
TNFRSF1A-204ENST00000440083 ELOA3DA6NLF2 546 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF1A-204ENST00000440083 ZNF701M0R085 212 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF1A-204ENST00000440083 NDUFB5O43674 189 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms