RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 B3GALNT1O75752 331 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 RASGRP1O95267 797 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 CXCL14O95715 111 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 HNRNPCL4P0DMR1 293 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 SRMP19623 302 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 ART1P52961 327 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 EPHB3P54753 998 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 SRSF3P84103 164 aaKnown RBP12.33□□□□□ -0.44
ACTN1-204ENST00000438964 DYRK1AQ13627 763 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 ZNF805Q5CZA5 627 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 UBE2NLQ5JXB2 153 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 GID4Q8IVV7 300 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 UBE2E3Q969T4 207 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 HS6ST2Q96MM7 605 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 C1QTNF2Q9BXJ5 285 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 SC5DO75845 299 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 AKR7A3O95154 331 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 HPP00738 406 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 ITPKBP27987 946 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 NRG3P56975 720 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 SHC2P98077 582 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 PRKCZQ05513 592 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 HAGHLQ6PII5 290 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-204ENST00000438964 UNQ6126/PRO20091Q6UXV3 157 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 NANPQ8TBE9 248 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 ZPLD1Q8TCW7 415 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 ULBP3Q9BZM4 244 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 C2orf42Q9NWW7 574 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 ZMAT5Q9UDW3 170 aaKnown RBP12.33□□□□□ -0.44
ACTN1-204ENST00000438964 INSL5Q9Y5Q6 135 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 DENND4AQ7Z401 1863 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 TRPM6Q9BX84 2022 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 REV3LO60673 3130 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 LAMA1P25391 3075 aa12.33□□□□□ -0.44
ACTN1-204ENST00000438964 FAM86C2PA6NEL3 165 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 FAM25EA8MYX2 175 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 GRM6O15303 877 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 DNAJB6O75190 326 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 TYRP14679 529 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 C4BPBP20851 252 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 DECR1Q16698 335 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 PUSL1Q8N0Z8 303 aaKnown RBP12.32□□□□□ -0.44
ACTN1-204ENST00000438964 LINC01555Q8NAE3 123 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 OR4C16Q8NGL9 310 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 OR4C6Q8NH72 309 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 CAMK1GQ96NX5 476 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 ARHGDIGQ99819 225 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 ZNF471Q9BX82 626 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-204ENST00000438964 SLC46A2Q9BY10 475 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 CPEB1Q9BZB8 566 aaKnown RBP12.32□□□□□ -0.44
ACTN1-204ENST00000438964 RHBGQ9H310 441 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 ASF1BQ9NVP2 202 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 TAS2R5Q9NYW4 299 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 OR5V1Q9UGF6 321 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 WDR45Q9Y484 360 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 NPFFR2Q9Y5X5 522 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 WDR87Q6ZQQ6 2873 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 TRBV23-1A0A0A0MS06 115 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 RIIAD1A6NNX1 92 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 KLF4O43474 513 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 LILRB5O75023 590 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 CDC123O75794 336 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-204ENST00000438964 FRRS1Q6ZNA5 592 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 ZNF761Q86XN6 746 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-204ENST00000438964 CMIPQ8IY22 773 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 C2orf15Q8WU43 125 aaKnown RBP12.32□□□□□ -0.44
ACTN1-204ENST00000438964 OVCA2Q8WZ82 227 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 TIFAQ96CG3 184 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 BPIFA2Q96DR5 249 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 TSSK2Q96PF2 358 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 PRSS27Q9BQR3 290 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 LGR4Q9BXB1 951 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 ADAP2Q9NPF8 381 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 EDARQ9UNE0 448 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 ZNF443Q9Y2A4 671 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-204ENST00000438964 SLC6A5Q9Y345 797 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 PLEKHM1Q9Y4G2 1056 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 SPTBN5Q9NRC6 3674 aaKnown RBP12.32□□□□□ -0.44
ACTN1-204ENST00000438964 UBE2QL1A1L167 161 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 ZNF860A6NHJ4 632 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 WASH3PC4AMC7 463 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 NANOS3P60323 173 aaKnown RBP12.32□□□□□ -0.44
ACTN1-204ENST00000438964 ELAVL2Q12926 359 aaKnown RBP12.32□□□□□ -0.44
ACTN1-204ENST00000438964 SLC9A5Q14940 896 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 LY6G5CQ5SRR4 150 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.32□□□□□ -0.443e-6■□□□□ 10.9
ACTN1-204ENST00000438964 ADIPOR2Q86V24 386 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 TMPRSS12Q86WS5 348 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 ACOT4Q8N9L9 421 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 OR7G2Q8NG99 324 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 TMEM239Q8WW34 195 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 PELOQ9BRX2 385 aaKnown RBP12.32□□□□□ -0.44
ACTN1-204ENST00000438964 CRB3Q9BUF7 120 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 GPN1Q9HCN4 374 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-204ENST00000438964 BCL2L10Q9HD36 194 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 ABRACLQ9P1F3 81 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 WNT6Q9Y6F9 365 aa12.32□□□□□ -0.44
ACTN1-204ENST00000438964 MPDZO75970 2070 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 IGKV1-8A0A0C4DH67 115 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 IFITM5A6NNB3 132 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms