RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 A0A1B0GX78 115 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 A0A1W2PQM1 296 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 A8MUA0 341 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 GABRPO00591 440 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 CASKO14936 926 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 TO15178 435 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 RNF13O43567 381 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 UTS2O95399 124 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 LALBAP00709 142 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 FOLR1P15328 257 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 GTF2E2P29084 291 aaKnown RBP11.74□□□□□ -0.53
DDX56-204ENST00000431640 CD79BP40259 229 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 NSDHLQ15738 373 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 SLC35D3Q5M8T2 416 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 MZT2AQ6P582 158 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 TMEM71Q6P5X7 295 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 POMGNT2Q8NAT1 580 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 FAM98AQ8NCA5 519 aaKnown RBP11.74□□□□□ -0.53
DDX56-204ENST00000431640 PLPP5Q8NEB5 264 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 OR10H4Q8NGA5 316 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 OR52E2Q8NGJ4 325 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 OR5W2Q8NH69 310 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 ASB15Q8WXK1 588 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 SMPDL3BQ92485 455 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 KISS1RQ969F8 398 aaPredicted RBP11.74□□□□□ -0.53
DDX56-204ENST00000431640 TMCO6Q96DC7 493 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 ITPKCQ96DU7 683 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 NUDT22Q9BRQ3 303 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 KATNB1Q9BVA0 655 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 TMED9Q9BVK6 235 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 HCAR1Q9BXC0 346 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 NXF5Q9H1B4 397 aaKnown RBP11.74□□□□□ -0.53
DDX56-204ENST00000431640 ZNF768Q9H5H4 540 aaKnown RBP11.74□□□□□ -0.53
DDX56-204ENST00000431640 RERGLQ9H628 205 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 DHCR7Q9UBM7 475 aaKnown RBP11.74□□□□□ -0.53
DDX56-204ENST00000431640 COPS7AQ9UBW8 275 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 SRPK3Q9UPE1 567 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 SLC6A5Q9Y345 797 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 PCDHGB2Q9Y5G2 931 aa11.74□□□□□ -0.53
DDX56-204ENST00000431640 A0A1W2PQD3 144 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 CPED1A4D0V7 1026 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 PROB1E7EW31 1015 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 REM1O75628 298 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 RGS9O75916 674 aaPredicted RBP11.73□□□□□ -0.53
DDX56-204ENST00000431640 DDAH2O95865 285 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 OR2T7P0C7T2 308 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 RPL4P36578 427 aaKnown RBP11.73□□□□□ -0.53
DDX56-204ENST00000431640 PPP3R1P63098 170 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 NHLH1Q02575 133 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 SKP2Q13309 424 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 PON3Q15166 354 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.73□□□□□ -0.53
DDX56-204ENST00000431640 ARHGAP40Q5TG30 622 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 XKRXQ6PP77 449 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 SLC29A4Q7RTT9 530 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 MARCH9Q86YJ5 346 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 TMEM99Q8N816 258 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 FAM83FQ8NEG4 500 aaPredicted RBP11.73□□□□□ -0.53
DDX56-204ENST00000431640 OR2T27Q8NH04 317 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 NEIL3Q8TAT5 605 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.73□□□□□ -0.53
DDX56-204ENST00000431640 KIAA1143Q96AT1 154 aaPredicted RBP11.73□□□□□ -0.53
DDX56-204ENST00000431640 ZNF501Q96CX3 271 aaPredicted RBP11.73□□□□□ -0.53
DDX56-204ENST00000431640 HDHD5Q9BXW7 423 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 ISG20L2Q9H9L3 353 aaKnown RBP11.73□□□□□ -0.53
DDX56-204ENST00000431640 ADGRL4Q9HBW9 690 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 TMEM9BQ9NQ34 198 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 FGF21Q9NSA1 209 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 ATXN7L1Q9ULK2 861 aaPredicted RBP11.73□□□□□ -0.53
DDX56-204ENST00000431640 YARS2Q9Y2Z4 477 aaKnown RBP11.73□□□□□ -0.53
DDX56-204ENST00000431640 IER3IP1Q9Y5U9 82 aa11.73□□□□□ -0.53
DDX56-204ENST00000431640 A0A1W2PQL4 384 aaPredicted RBP11.72□□□□□ -0.53
DDX56-204ENST00000431640 C4orf47A7E2U8 309 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 A8MU76 341 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 IMPA2O14732 288 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 FLRT2O43155 660 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 PLPP2O43688 288 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 EIF4E2O60573 245 aaKnown RBP11.72□□□□□ -0.53
DDX56-204ENST00000431640 LRP3O75074 770 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 APEHP13798 732 aaKnown RBP11.72□□□□□ -0.53
DDX56-204ENST00000431640 PTBP1P26599 531 aaKnown RBP eCLIP11.72□□□□□ -0.53
DDX56-204ENST00000431640 IL12BP29460 328 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 PNLIPRP2P54317 469 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 ACY1Q03154 408 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 IL10RAQ13651 578 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 METAP1DQ6UB28 335 aaPredicted RBP11.72□□□□□ -0.53
DDX56-204ENST00000431640 ATG4DQ86TL0 474 aaPredicted RBP11.72□□□□□ -0.53
DDX56-204ENST00000431640 NAXDQ8IW45 347 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 OR8H2Q8N162 312 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 ZFP41Q8N8Y5 198 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 GDPD1Q8N9F7 314 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 C17orf47Q8NEP4 570 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 OR1N1Q8NGS0 311 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 IFI44Q8TCB0 444 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 ACOT12Q8WYK0 555 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 TSLPQ969D9 159 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 GPX7Q96SL4 187 aaPredicted RBP11.72□□□□□ -0.53
DDX56-204ENST00000431640 NEURL2Q9BR09 285 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 NUDT9Q9BW91 350 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 TGIF2Q9GZN2 237 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms