RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 MFNGO00587 321 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 GRM6O15303 877 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 HCRTO43612 131 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 DHODHQ02127 395 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 FABP9Q0Z7S8 132 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 MAP2K5Q13163 448 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 VRK2Q86Y07 508 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 GALNT16Q8N428 558 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 C2orf73Q8N5S3 287 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 BEND7Q8N7W2 519 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 PADI3Q9ULW8 664 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 NPIPA5E9PKD4 350 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 NPIPA3F8WFD2 350 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 XKRYO14609 159 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 STARD6P59095 220 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 TAS2R30P59541 319 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 SLC10A1Q14973 349 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 CEACAM19Q7Z692 300 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 NETO1Q8TDF5 533 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 IMP4Q96G21 291 aaKnown RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 KXD1Q9BQD3 176 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 SYT3Q9BQG1 590 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 NPIPA1Q9UND3 350 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 FCF1Q9Y324 198 aaKnown RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 USP3Q9Y6I4 520 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 TGIF2-C20orf24A0A0A6YYL0 155 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 H0YIV9 168 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 SYT5O00445 386 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 ZNF749O43361 778 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 OR6A2O95222 327 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 KCNE1P15382 129 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 AQP6Q13520 282 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 OR4D1Q15615 310 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 OLIG1Q8TAK6 271 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 RNF170Q96K19 258 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 NDRG2Q9UN36 371 aaKnown RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 MMP24Q9Y5R2 645 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 A8MU76 341 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 ERVH48-1M5A8F1 160 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 QDPRP09417 244 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 BSGP35613 385 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 SIM1P81133 766 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 KCTD18Q6PI47 426 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 TGIF2Q9GZN2 237 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 NAA50Q9GZZ1 169 aaKnown RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 NSUN3Q9H649 340 aaKnown RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 ZNF385DQ9H6B1 395 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 TMEM38AQ9H6F2 299 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 LOC730098B7Z3J9 87 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 NFKBIEO00221 500 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 SULT1A3P0DMM9 295 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 SULT1A4P0DMN0 295 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 CR2P20023 1033 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 ADH7P40394 386 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 OR4D2P58180 307 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 PJVKQ0ZLH3 352 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 GAGE1Q13065 139 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 TNFAIP8L2Q6P589 184 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 TRILQ7L0X0 811 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 OR4M1Q8NGD0 313 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 OR5AK3PQ8NH89 298 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 FOXN4Q96NZ1 517 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 PARD6AQ9NPB6 346 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 CA14Q9ULX7 337 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 GABRR3A8MPY1 467 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 TBX18O95935 607 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 OR1D2P34982 312 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 GDF5P43026 501 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 SERPINA12Q8IW75 414 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 SLC35F2Q8IXU6 374 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 IQCF1Q8N6M8 205 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 F2RL3Q96RI0 385 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 ACTR3CQ9C0K3 210 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 ARNT2Q9HBZ2 717 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 OR52A1Q9UKL2 312 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 PHF3Q92576 2039 aaKnown RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 ROS1P08922 2347 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 ZNF888P0CJ79 500 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 OR1E2P47887 323 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 HBG1P69891 147 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 HBG2P69892 147 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 MICBQ29980 383 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 MS4A13Q5J8X5 152 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 GLDNQ6ZMI3 551 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 FUBP3Q96I24 572 aaKnown RBP eCLIP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 DPH2Q9BQC3 489 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 ZCCHC4Q9H5U6 513 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 RDH14Q9HBH5 336 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 EXOSC3Q9NQT5 275 aaKnown RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 PDLIM7Q9NR12 457 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 CARHSP1Q9Y2V2 147 aaKnown RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 SLC22A7Q9Y694 548 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 FAM74A7A6NL05 159 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 E7EQ34 232 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 PIRO00625 290 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 GOSR2O14653 212 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 FGF2P09038 288 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 SLC35G4P0C7Q5 338 aa7.03□□□□□ -1.28
SYNPO2-202ENST00000429713 DTYMKP23919 212 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms