RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 IL1RAPQ9NPH3 570 aa13.39□□□□□ -0.27
GARNL3-204ENST00000429629 NDUFAF4Q9P032 175 aa13.39□□□□□ -0.27
GARNL3-204ENST00000429629 SH3BGRL2Q9UJC5 107 aa13.39□□□□□ -0.27
GARNL3-204ENST00000429629 A4GNTQ9UNA3 340 aa13.39□□□□□ -0.27
GARNL3-204ENST00000429629 FASNP49327 2511 aaKnown RBP13.39□□□□□ -0.27
GARNL3-204ENST00000429629 DNAJC13O75165 2243 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 IGKV1D-42A0A075B6H8 117 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 TRAV36DV7A0A075B6V5 113 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 ZC3H12DA2A288 527 aaKnown RBP13.38□□□□□ -0.27
GARNL3-204ENST00000429629 LIPT2A6NK58 231 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 CPSF4LA6NMK7 179 aaKnown RBP13.38□□□□□ -0.27
GARNL3-204ENST00000429629 PDE5AO76074 875 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 PRSS23O95084 383 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 AHSA1O95433 338 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 OPN1LWP04000 364 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 THY1P04216 161 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 TNFRSF1BP20333 461 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 PCYT1AP49585 367 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 TAS2R41P59536 307 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 GABPB1Q06547 395 aaPredicted RBP13.38□□□□□ -0.27
GARNL3-204ENST00000429629 PIN1Q13526 163 aaPredicted RBP13.38□□□□□ -0.27
GARNL3-204ENST00000429629 GUSBP1Q15486 140 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 IQCCQ4KMZ1 466 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 FAM69AQ5T7M9 428 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 PAQR6Q6TCH4 344 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 DEF8Q6ZN54 512 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 P4HA3Q7Z4N8 544 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 GDF7Q7Z4P5 450 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 TSPYL5Q86VY4 417 aaPredicted RBP13.38□□□□□ -0.27
GARNL3-204ENST00000429629 RNF113BQ8IZP6 322 aaKnown RBP13.38□□□□□ -0.27
GARNL3-204ENST00000429629 RPRMLQ8N4K4 120 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 C9orf106Q8NAJ2 232 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 RNF128Q8TEB7 428 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 GMPPAQ96IJ6 420 aaPredicted RBP13.38□□□□□ -0.27
GARNL3-204ENST00000429629 ZNF845Q96IR2 970 aaPredicted RBP13.38□□□□□ -0.27
GARNL3-204ENST00000429629 CLPTM1LQ96KA5 538 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 LRGUKQ96M69 825 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 ZNF300Q96RE9 604 aaPredicted RBP13.38□□□□□ -0.27
GARNL3-204ENST00000429629 ZNF347Q96SE7 839 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 PRSS27Q9BQR3 290 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 NAA11Q9BSU3 229 aaPredicted RBP13.38□□□□□ -0.27
GARNL3-204ENST00000429629 SFXN3Q9BWM7 321 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 PRRG4Q9BZD6 226 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 OR11A1Q9GZK7 315 aa13.38□□□□□ -0.27
GARNL3-204ENST00000429629 FAM32AQ9Y421 112 aaKnown RBP13.38□□□□□ -0.27
GARNL3-204ENST00000429629 IGKV3D-15A0A087WSY6 115 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 A0A0G2JNJ9 132 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 LOC102725191A0A1B0GVB3 256 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 A0A1W2PNR3 127 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 A0A1W2PRQ8 180 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 TCRBV5S2A0A599 114 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 FTCDNL1E5RQL4 147 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 PYCARD-AS1I3L0S3 204 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 CYTIPO60759 359 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 VAMP5O95183 116 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 MT-ATP6P00846 226 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 IMPDH2P12268 514 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 CCNA2P20248 432 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 MAGEA2P43356 314 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 SLC16A1P53985 500 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 SMIM11AP58511 58 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 DGCR6Q14129 220 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 TTC33Q6PID6 262 aaPredicted RBP13.37□□□□□ -0.27
GARNL3-204ENST00000429629 FCRLAQ7L513 359 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 MAMDC2Q7Z304 686 aaPredicted RBP13.37□□□□□ -0.27
GARNL3-204ENST00000429629 TSEN54Q7Z6J9 526 aaKnown RBP13.37□□□□□ -0.27
GARNL3-204ENST00000429629 MRGPRGQ86SM5 289 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 PIK3C3Q8NEB9 887 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 OR10Q1Q8NGQ4 319 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 ITLN2Q8WWU7 325 aaPredicted RBP13.37□□□□□ -0.27
GARNL3-204ENST00000429629 DHRS1Q96LJ7 313 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 PTDSS2Q9BVG9 487 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 FNDC11Q9BVV2 318 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 SF3B5Q9BWJ5 86 aaKnown RBP13.37□□□□□ -0.27
GARNL3-204ENST00000429629 TAPBPLQ9BX59 468 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 SRXN1Q9BYN0 137 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 BCO1Q9HAY6 547 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 KLHL9Q9P2J3 617 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 Q9UFV3 132 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 SLC7A8Q9UHI5 535 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 SLC7A7Q9UM01 511 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 POMPQ9Y244 141 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 RNF6Q9Y252 685 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 B3GALT5Q9Y2C3 310 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 CORINQ9Y5Q5 1042 aa13.37□□□□□ -0.27
GARNL3-204ENST00000429629 ZGRF1Q86YA3 2104 aa13.36□□□□□ -0.27
GARNL3-204ENST00000429629 ZNF724A8MTY0 619 aa13.36□□□□□ -0.27
GARNL3-204ENST00000429629 DVL2O14641 736 aa13.36□□□□□ -0.27
GARNL3-204ENST00000429629 FFAR1O14842 300 aa13.36□□□□□ -0.27
GARNL3-204ENST00000429629 SMAD9O15198 467 aaKnown RBP13.36□□□□□ -0.27
GARNL3-204ENST00000429629 SS18L1O75177 396 aaPredicted RBP13.36□□□□□ -0.27
GARNL3-204ENST00000429629 AQP8O94778 261 aa13.36□□□□□ -0.27
GARNL3-204ENST00000429629 TMIGD3P0DMS9 266 aaPredicted RBP13.36□□□□□ -0.27
GARNL3-204ENST00000429629 ATP6V1B2P21281 511 aa13.36□□□□□ -0.27
GARNL3-204ENST00000429629 FPR1P21462 350 aa13.36□□□□□ -0.27
GARNL3-204ENST00000429629 OR2B6P58173 313 aa13.36□□□□□ -0.27
GARNL3-204ENST00000429629 TRAM2Q15035 370 aa13.36□□□□□ -0.27
GARNL3-204ENST00000429629 SLC25A35Q3KQZ1 300 aa13.36□□□□□ -0.27
GARNL3-204ENST00000429629 FAM98BQ52LJ0 330 aaKnown RBP13.36□□□□□ -0.27
GARNL3-204ENST00000429629 CYP2R1Q6VVX0 501 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms