RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 MAGEB17A8MXT2 336 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 CDRT15L2A8MXV6 281 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 ZNF587BE7ETH6 402 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 H3BRB1 525 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 GABARAPH6UMI1 98 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 MATN3O15232 486 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 OGG1O15527 345 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 PRODHO43272 600 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 TLX2O43763 284 aaPredicted RBP8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 PRAMEF12O95522 483 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 GSTP1P09211 210 aaKnown RBP8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 PPIBP23284 216 aaKnown RBP8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 FEN1P39748 380 aaKnown RBP8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 CHRNA4P43681 627 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 SLC11A2P49281 568 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 TPI1P60174 286 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 EFNB1P98172 346 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 NAAAQ02083 359 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 SRSF4Q08170 494 aaKnown RBP8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 LMAN2Q12907 356 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 MTAPQ13126 283 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 GTF2H2Q13888 395 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 JOSD1Q15040 202 aaPredicted RBP8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 TEAD2Q15562 447 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 ELAVL1Q15717 326 aaKnown RBP8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 LINC00303Q3SY05 128 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 KHDC3LQ587J8 217 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 RNASE12Q5GAN4 147 aaKnown RBP8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 CXorf57Q6NSI4 855 aaKnown RBP8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 GTF2H2CQ6P1K8 395 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 PAQR3Q6TCH7 311 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 DNAJB7Q7Z6W7 309 aaPredicted RBP8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 LDB1Q86U70 411 aaPredicted RBP8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 GPSM1Q86YR5 675 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 BPIFB2Q8N4F0 458 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 ARL14Q8N4G2 192 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 LRRC52Q8N7C0 313 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 SLC30A7Q8NEW0 376 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 PAQR8Q8TEZ7 354 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 MVB12AQ96EY5 273 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 SAT2Q96F10 170 aaPredicted RBP8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 MS4A4AQ96JQ5 239 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 TMEM231Q9H6L2 316 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 MEPEQ9NQ76 525 aaPredicted RBP8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 MRPL17Q9NRX2 175 aaKnown RBP8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 TAS2R13Q9NYV9 303 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 SLC27A6Q9Y2P4 619 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 ATG4BQ9Y4P1 393 aa8.21□□□□□ -1.1
CDC42BPA-206ENST00000429440 TRIP12Q14669 1992 aaPredicted RBP8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 A0A0G2JK05 382 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 GSAPA4D1B5 854 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 DUXAA6NLW8 204 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 DVL1O14640 695 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 HCRTO43612 131 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 CTNSO60931 367 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 GLCEO94923 617 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 RPLP1P05386 114 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 ASGR2P07307 311 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 TBC1D3HP0C7X1 549 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 ADH6P28332 368 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 GDI1P31150 447 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 IL2RGP31785 369 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 SERPINF1P36955 418 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 RAB1AP62820 205 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 LSM11P83369 360 aaKnown RBP eCLIP8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 SCAPQ12770 1279 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 ZBTB6Q15916 424 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 ARMC12Q5T9G4 340 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 EIF5AL1Q6IS14 154 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 MRNIPQ6NTE8 343 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 KIAA1211LQ6NV74 962 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 HEPN1Q6WQI6 88 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 DCXRQ7Z4W1 244 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 BCDIN3DQ7Z5W3 292 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 CD163Q86VB7 1156 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 THOC6Q86W42 341 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 SLC30A8Q8IWU4 369 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 CBARPQ8N350 705 aaPredicted RBP8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 ZNF664Q8N3J9 261 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 FAM24BQ8N5W8 94 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 OR13C8Q8NGS7 320 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 OR9A1PQ8NGU1 263 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 NUDCD2Q8WVJ2 157 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 GEMIN6Q8WXD5 167 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 GALNT14Q96FL9 552 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 HSPA12BQ96MM6 686 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 MRI1Q9BV20 369 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 TRMT61BQ9BVS5 477 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 SYT4Q9H2B2 425 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 PTGFRNQ9P2B2 879 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 OR14J1Q9UGF5 321 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 ENPP4Q9Y6X5 453 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 NUP205Q92621 2012 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 ANKRD20A5PA0PJZ0 165 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 PHOX2AO14813 284 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 GCM2O75603 506 aaPredicted RBP8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 PKMP14618 531 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 OR1E1P30953 314 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 SOX18P35713 384 aa8.2□□□□□ -1.1
CDC42BPA-206ENST00000429440 KIR3DL1P43629 444 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms