RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 NFATC1O95644 943 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 CEACAM5P06731 702 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 NGFRP08138 427 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 RBMS1P29558 406 aaKnown RBP11.5□□□□□ -0.57
CDH3-202ENST00000429102 PRKAR1BP31321 381 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 MAT1AQ00266 395 aaKnown RBP11.5□□□□□ -0.57
CDH3-202ENST00000429102 PON3Q15166 354 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 DGAT2L6Q6ZPD8 337 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 TMIEQ8NEW7 156 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 SYNPRQ8TBG9 265 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 RPP25Q9BUL9 199 aaKnown RBP11.5□□□□□ -0.57
CDH3-202ENST00000429102 EXOGQ9Y2C4 368 aaKnown RBP11.5□□□□□ -0.57
CDH3-202ENST00000429102 NUBP2Q9Y5Y2 271 aa11.5□□□□□ -0.57
CDH3-202ENST00000429102 BHLHE40O14503 412 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 RDH16O75452 317 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 IFNA7P01567 189 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 CAMK2DQ13557 499 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 RELL2Q8NC24 303 aaPredicted RBP11.49□□□□□ -0.57
CDH3-202ENST00000429102 ZBTB44Q8NCP5 570 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 OR52R1Q8NGF1 315 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 CXorf58Q96LI9 332 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 ARL6Q9H0F7 186 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 NOX3Q9HBY0 568 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 MRPS18AQ9NVS2 196 aaKnown RBP11.49□□□□□ -0.57
CDH3-202ENST00000429102 TBX21Q9UL17 535 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 SIGLEC7Q9Y286 467 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 LOC105371267A0A1B0GV96 52 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 ATP6V1G2-DDX39BF2Z307 99 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 CACNB4O00305 520 aaPredicted RBP11.49□□□□□ -0.57
CDH3-202ENST00000429102 PLGP00747 810 aaPredicted RBP11.49□□□□□ -0.57
CDH3-202ENST00000429102 IFNA16P05015 189 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 ERVK-21P61565 698 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 FAM53BQ14153 422 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 PDGFRLQ15198 375 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 FBXO42Q6P3S6 717 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 TMEM64Q6YI46 380 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 ZNF782Q6ZMW2 699 aaPredicted RBP11.49□□□□□ -0.57
CDH3-202ENST00000429102 CFAP77Q6ZQR2 320 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 GLRX5Q86SX6 157 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 SRFBP1Q8NEF9 429 aaKnown RBP11.49□□□□□ -0.57
CDH3-202ENST00000429102 TTLQ8NG68 377 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 THEM6Q8WUY1 208 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 KISS1RQ969F8 398 aaPredicted RBP11.49□□□□□ -0.57
CDH3-202ENST00000429102 ZC3HAV1LQ96H79 300 aaKnown RBP11.49□□□□□ -0.57
CDH3-202ENST00000429102 COX14Q96I36 57 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 LMF1Q96S06 567 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 DHRS9Q9BPW9 319 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 SLC17A9Q9BYT1 436 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 RSPH9Q9H1X1 276 aaPredicted RBP11.49□□□□□ -0.57
CDH3-202ENST00000429102 KCNN3Q9UGI6 736 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 SLC35A3Q9Y2D2 325 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.49□□□□□ -0.57
CDH3-202ENST00000429102 A0A1W2PPL8 197 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 C17orf51A8MQB3 221 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 SYT5O00445 386 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 ZP1P60852 638 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 SIRPAP78324 504 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 GUCA2AQ02747 115 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 SLC25A30Q5SVS4 291 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 AGBL4Q5VU57 503 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 HEPHL1Q6MZM0 1159 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 GALNT6Q8NCL4 622 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 SCMH1Q96GD3 660 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 RBP7Q96R05 134 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 LMAN2LQ9H0V9 348 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 B3GNT2Q9NY97 397 aa11.49□□□□□ -0.57
CDH3-202ENST00000429102 A0A0G2JK05 382 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 A0A1B0GVI7 797 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 HCRTR1O43613 425 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 PRICKLE3O43900 615 aaPredicted RBP11.48□□□□□ -0.57
CDH3-202ENST00000429102 PKLRP30613 574 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 HSD17B2P37059 387 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 MAP2K6P52564 334 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 PUDPQ08623 228 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 RNLSQ5VYX0 342 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 SPERTQ8NA61 448 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 SPPL3Q8TCT6 385 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 TNFAIP8L1Q8WVP5 186 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 SPACA7Q96KW9 195 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 Q96M85 177 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 ZNF436Q9C0F3 470 aaPredicted RBP11.48□□□□□ -0.57
CDH3-202ENST00000429102 NT5DC2Q9H857 520 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 TCF7L1Q9HCS4 588 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 CMC2Q9NRP2 79 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 CDV3Q9UKY7 258 aaKnown RBP11.48□□□□□ -0.57
CDH3-202ENST00000429102 MAB21L2Q9Y586 359 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 FAM25EA8MYX2 175 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 C11orf98E9PRG8 122 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 KHNYNO15037 678 aaKnown RBP11.48□□□□□ -0.57
CDH3-202ENST00000429102 SEC14L5O43304 696 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 TDRD6O60522 2096 aaKnown RBP11.48□□□□□ -0.57
CDH3-202ENST00000429102 GJA4P35212 333 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 PPP2CBP62714 309 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 PPP2CAP67775 309 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 OPCMLQ14982 345 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 SMAD2Q15796 467 aaKnown RBP11.48□□□□□ -0.57
CDH3-202ENST00000429102 AANATQ16613 207 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 LINC00303Q3SY05 128 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 LEG1Q6P5S2 330 aa11.48□□□□□ -0.57
CDH3-202ENST00000429102 SLC35F2Q8IXU6 374 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms