RNA–Protein interactions for RNA: ENST00000426921.5

UBXN4-204, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-204ENST00000426921 C1QTNF12Q5T7M4 302 aa18.32■□□□□ 0.52
UBXN4-204ENST00000426921 RNF220Q5VTB9 566 aa18.32■□□□□ 0.52
UBXN4-204ENST00000426921 MAVSQ7Z434 540 aa18.32■□□□□ 0.52
UBXN4-204ENST00000426921 C1orf162Q8NEQ5 155 aaPredicted RBP18.32■□□□□ 0.52
UBXN4-204ENST00000426921 TMEM45BQ96B21 275 aa18.32■□□□□ 0.52
UBXN4-204ENST00000426921 NAA11Q9BSU3 229 aaPredicted RBP18.32■□□□□ 0.52
UBXN4-204ENST00000426921 ALG2Q9H553 416 aa18.32■□□□□ 0.52
UBXN4-204ENST00000426921 RLIMQ9NVW2 624 aa18.32■□□□□ 0.52
UBXN4-204ENST00000426921 PARPBPQ9NWS1 579 aa18.32■□□□□ 0.52
UBXN4-204ENST00000426921 CALML5Q9NZT1 146 aa18.32■□□□□ 0.52
UBXN4-204ENST00000426921 DCTN4Q9UJW0 460 aa18.32■□□□□ 0.52
UBXN4-204ENST00000426921 PLCE1Q9P212 2302 aa18.32■□□□□ 0.52
UBXN4-204ENST00000426921 TFPTP0C1Z6 253 aa18.31■□□□□ 0.52
UBXN4-204ENST00000426921 ACAA2P42765 397 aaKnown RBP18.31■□□□□ 0.52
UBXN4-204ENST00000426921 CRISP3P54108 245 aa18.31■□□□□ 0.52
UBXN4-204ENST00000426921 FOXG1P55316 489 aaPredicted RBP18.31■□□□□ 0.52
UBXN4-204ENST00000426921 PPP2R2BQ00005 443 aa18.31■□□□□ 0.52
UBXN4-204ENST00000426921 ZSWIM7Q19AV6 140 aa18.31■□□□□ 0.52
UBXN4-204ENST00000426921 NXNQ6DKJ4 435 aa18.31■□□□□ 0.52
UBXN4-204ENST00000426921 KLHL17Q6TDP4 642 aa18.31■□□□□ 0.52
UBXN4-204ENST00000426921 CASP12Q6UXS9 341 aa18.31■□□□□ 0.52
UBXN4-204ENST00000426921 ZNF836Q6ZNA1 936 aa18.31■□□□□ 0.52
UBXN4-204ENST00000426921 C17orf78Q8N4C9 275 aa18.31■□□□□ 0.52
UBXN4-204ENST00000426921 OR52E4Q8NGH9 312 aa18.31■□□□□ 0.52
UBXN4-204ENST00000426921 OR52N5Q8NH56 324 aa18.31■□□□□ 0.52
UBXN4-204ENST00000426921 MGARPQ8TDB4 240 aa18.31■□□□□ 0.52
UBXN4-204ENST00000426921 TLCD1Q96CP7 247 aa18.31■□□□□ 0.52
UBXN4-204ENST00000426921 TPT1P8Q9HAU6 139 aa18.31■□□□□ 0.52
UBXN4-204ENST00000426921 BARX1Q9HBU1 254 aaPredicted RBP18.31■□□□□ 0.52
UBXN4-204ENST00000426921 LIPT2A6NK58 231 aa18.3■□□□□ 0.52
UBXN4-204ENST00000426921 CCT8L1PA6NM43 557 aa18.3■□□□□ 0.52
UBXN4-204ENST00000426921 RNF223E7ERA6 249 aa18.3■□□□□ 0.52
UBXN4-204ENST00000426921 KLF11O14901 512 aa18.3■□□□□ 0.52
UBXN4-204ENST00000426921 ETFAP13804 333 aa18.3■□□□□ 0.52
UBXN4-204ENST00000426921 CD40P25942 277 aa18.3■□□□□ 0.52
UBXN4-204ENST00000426921 ACVR1BP36896 505 aa18.3■□□□□ 0.52
UBXN4-204ENST00000426921 C11orf71Q6IPW1 123 aa18.3■□□□□ 0.52
UBXN4-204ENST00000426921 LSRQ86X29 649 aaPredicted RBP18.3■□□□□ 0.52
UBXN4-204ENST00000426921 VRK2Q86Y07 508 aa18.3■□□□□ 0.52
UBXN4-204ENST00000426921 OR52P1PQ8NH57 321 aa18.3■□□□□ 0.52
UBXN4-204ENST00000426921 SLC38A5Q8WUX1 472 aa18.3■□□□□ 0.52
UBXN4-204ENST00000426921 SF3B5Q9BWJ5 86 aaKnown RBP18.3■□□□□ 0.52
UBXN4-204ENST00000426921 REG4Q9BYZ8 158 aa18.3■□□□□ 0.52
UBXN4-204ENST00000426921 PIF1Q9H611 641 aa18.3■□□□□ 0.52
UBXN4-204ENST00000426921 RMND5AQ9H871 391 aa18.3■□□□□ 0.52
UBXN4-204ENST00000426921 MANSC1Q9H8J5 431 aa18.3■□□□□ 0.52
UBXN4-204ENST00000426921 SLC7A10Q9NS82 523 aa18.3■□□□□ 0.52
UBXN4-204ENST00000426921 THUMPD1Q9NXG2 353 aaKnown RBP18.3■□□□□ 0.52
UBXN4-204ENST00000426921 E7EQL1 145 aa18.29■□□□□ 0.52
UBXN4-204ENST00000426921 NDUFS7O75251 213 aa18.29■□□□□ 0.52
UBXN4-204ENST00000426921 BCHEP06276 602 aa18.29■□□□□ 0.52
UBXN4-204ENST00000426921 GPIP06744 558 aa18.29■□□□□ 0.52
UBXN4-204ENST00000426921 DSTNP60981 165 aa18.29■□□□□ 0.52
UBXN4-204ENST00000426921 MAGOHP61326 146 aaKnown RBP18.29■□□□□ 0.52
UBXN4-204ENST00000426921 SPOCK1Q08629 439 aa18.29■□□□□ 0.52
UBXN4-204ENST00000426921 NRF1Q16656 503 aa18.29■□□□□ 0.52
UBXN4-204ENST00000426921 OTUD3Q5T2D3 398 aaPredicted RBP18.29■□□□□ 0.52
UBXN4-204ENST00000426921 AGAP6Q5VW22 663 aa18.29■□□□□ 0.52
UBXN4-204ENST00000426921 WBP2NLQ6ICG8 309 aa18.29■□□□□ 0.52
UBXN4-204ENST00000426921 WDR31Q8NA23 367 aa18.29■□□□□ 0.52
UBXN4-204ENST00000426921 VPS33AQ96AX1 596 aa18.29■□□□□ 0.52
UBXN4-204ENST00000426921 BOD1Q96IK1 185 aa18.29■□□□□ 0.52
UBXN4-204ENST00000426921 ITCHQ96J02 903 aa18.29■□□□□ 0.52
UBXN4-204ENST00000426921 OR52B2Q96RD2 323 aa18.29■□□□□ 0.52
UBXN4-204ENST00000426921 NKIRAS1Q9NYS0 192 aa18.29■□□□□ 0.52
UBXN4-204ENST00000426921 ZNF443Q9Y2A4 671 aaPredicted RBP18.29■□□□□ 0.52
UBXN4-204ENST00000426921 CHST2Q9Y4C5 530 aa18.29■□□□□ 0.52
UBXN4-204ENST00000426921 AQP7P3A6NL99 342 aa18.28■□□□□ 0.52
UBXN4-204ENST00000426921 GKN3PP0CG01 181 aa18.28■□□□□ 0.52
UBXN4-204ENST00000426921 CXCR1P25024 350 aa18.28■□□□□ 0.52
UBXN4-204ENST00000426921 TTKP33981 857 aa18.28■□□□□ 0.52
UBXN4-204ENST00000426921 CRATP43155 626 aa18.28■□□□□ 0.52
UBXN4-204ENST00000426921 ZNF83P51522 516 aa18.28■□□□□ 0.52
UBXN4-204ENST00000426921 GTDC1Q4AE62 458 aa18.28■□□□□ 0.52
UBXN4-204ENST00000426921 TSPO2Q5TGU0 170 aa18.28■□□□□ 0.52
UBXN4-204ENST00000426921 PIAS4Q8N2W9 510 aaPredicted RBP18.28■□□□□ 0.52
UBXN4-204ENST00000426921 ZIC4Q8N9L1 334 aa18.28■□□□□ 0.52
UBXN4-204ENST00000426921 OR9I1Q8NGQ6 314 aa18.28■□□□□ 0.52
UBXN4-204ENST00000426921 AURKBQ96GD4 344 aaPredicted RBP18.28■□□□□ 0.52
UBXN4-204ENST00000426921 TMEM19Q96HH6 336 aa18.28■□□□□ 0.52
UBXN4-204ENST00000426921 HS6ST2Q96MM7 605 aa18.28■□□□□ 0.52
UBXN4-204ENST00000426921 DHRS9Q9BPW9 319 aa18.28■□□□□ 0.52
UBXN4-204ENST00000426921 SLC17A5Q9NRA2 495 aa18.28■□□□□ 0.52
UBXN4-204ENST00000426921 GDF2Q9UK05 429 aaPredicted RBP18.28■□□□□ 0.52
UBXN4-204ENST00000426921 B3GALT5Q9Y2C3 310 aa18.28■□□□□ 0.52
UBXN4-204ENST00000426921 AMDHD2Q9Y303 409 aa18.28■□□□□ 0.52
UBXN4-204ENST00000426921 CR1P17927 2039 aa18.27■□□□□ 0.52
UBXN4-204ENST00000426921 A0A0G2JPF8 293 aa18.27■□□□□ 0.52
UBXN4-204ENST00000426921 A0A1W2PR80 420 aa18.27■□□□□ 0.52
UBXN4-204ENST00000426921 HNRNPCL2B2RXH8 293 aa18.27■□□□□ 0.52
UBXN4-204ENST00000426921 HNRNPCL3B7ZW38 293 aa18.27■□□□□ 0.52
UBXN4-204ENST00000426921 UBDO15205 165 aa18.27■□□□□ 0.52
UBXN4-204ENST00000426921 HNRNPCL1O60812 293 aaKnown RBP18.27■□□□□ 0.52
UBXN4-204ENST00000426921 NPIPB7O75200 414 aa18.27■□□□□ 0.52
UBXN4-204ENST00000426921 ANP32DO95626 131 aa18.27■□□□□ 0.52
UBXN4-204ENST00000426921 HNRNPCL4P0DMR1 293 aa18.27■□□□□ 0.52
UBXN4-204ENST00000426921 HOXB9P17482 250 aaPredicted RBP18.27■□□□□ 0.52
UBXN4-204ENST00000426921 MPGP29372 298 aa18.27■□□□□ 0.52
UBXN4-204ENST00000426921 MRPL19P49406 292 aaKnown RBP18.27■□□□□ 0.52
UBXN4-204ENST00000426921 P2RY4P51582 365 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms