RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 ZNF232Q9UNY5 417 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 IFT52Q9Y366 437 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.26□□□□□ -0.61
SGCE-203ENST00000425444 TMEM72A0PK05 275 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 CDHR4A6H8M9 788 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 ZNF724A8MTY0 619 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 RNF223E7ERA6 249 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 FAAHO00519 579 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 GCM2O75603 506 aaPredicted RBP11.26□□□□□ -0.61
SGCE-203ENST00000425444 SASH3O75995 380 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 ADAP00813 363 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 THBDP07204 575 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 THBS1P07996 1170 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 CXCR1P25024 350 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 OR3A2P47893 321 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 CLK1P49759 484 aaKnown RBP11.26□□□□□ -0.61
SGCE-203ENST00000425444 TSC22D1Q15714 1073 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 ZSWIM7Q19AV6 140 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 ZNF311Q5JNZ3 666 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 LRIF1Q5T3J3 769 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 SFRP5Q5T4F7 317 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 GCNT6Q5T4J0 391 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 C22orf34Q6ZV56 151 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 FUNDC1Q8IVP5 155 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 ZNF100Q8IYN0 542 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 PIGXQ8TBF5 258 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 KISS1RQ969F8 398 aaPredicted RBP11.26□□□□□ -0.61
SGCE-203ENST00000425444 MAL2Q969L2 176 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 HS3ST6Q96QI5 342 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 SPATA9Q9BWV2 254 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 HDHD5Q9BXW7 423 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 AMBRA1Q9C0C7 1298 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 RABEP2Q9H5N1 569 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 A4GALTQ9NPC4 353 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.26□□□□□ -0.61
SGCE-203ENST00000425444 PRSS50Q9UI38 385 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 DCTN4Q9UJW0 460 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 ING1Q9UK53 422 aaPredicted RBP11.26□□□□□ -0.61
SGCE-203ENST00000425444 TRIM33Q9UPN9 1127 aa11.26□□□□□ -0.61
SGCE-203ENST00000425444 CR1P17927 2039 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 A0A0G2JND7 137 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 ZNF208O43345 1280 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 DNPH1O43598 174 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 FAM157CP0CG43 387 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 HOXB9P17482 250 aaPredicted RBP11.25□□□□□ -0.61
SGCE-203ENST00000425444 IDUAP35475 653 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 SLC35A1P78382 337 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 CAPRIN1Q14444 709 aaKnown RBP11.25□□□□□ -0.61
SGCE-203ENST00000425444 P2RY6Q15077 328 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 STK11Q15831 433 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 PAGE3Q5JUK9 113 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 PRAMEF8Q5VWM4 474 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 PRAMEF7Q5VXH5 474 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 WBP2NLQ6ICG8 309 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 Q6ZT83 130 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 BHLHA15Q7RTS1 189 aaPredicted RBP11.25□□□□□ -0.61
SGCE-203ENST00000425444 MSRB3Q8IXL7 192 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 UBE2J2Q8N2K1 259 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 NFKBIDQ8NI38 313 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 PLPPR2Q96GM1 343 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 SIKE1Q9BRV8 207 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 NAA11Q9BSU3 229 aaPredicted RBP11.25□□□□□ -0.61
SGCE-203ENST00000425444 TMEM45AQ9NWC5 275 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 SLC25A37Q9NYZ2 338 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 SLAMF8Q9P0V8 285 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 LEF1Q9UJU2 399 aaPredicted RBP11.25□□□□□ -0.61
SGCE-203ENST00000425444 CORO2BQ9UQ03 480 aa11.25□□□□□ -0.61
SGCE-203ENST00000425444 NOSIPQ9Y314 301 aaKnown RBP11.25□□□□□ -0.61
SGCE-203ENST00000425444 IGKV3D-15A0A087WSY6 115 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 A0A1W2PP18 115 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 ZC3H12DA2A288 527 aaKnown RBP11.24□□□□□ -0.61
SGCE-203ENST00000425444 EVPLLA8MZ36 301 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 ZNF814B7Z6K7 855 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 GPR171O14626 319 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 ANGPT2O15123 496 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 FRS3O43559 492 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 CD5LO43866 347 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 EIF1BO60739 113 aaKnown RBP11.24□□□□□ -0.61
SGCE-203ENST00000425444 EDF1O60869 148 aaKnown RBP11.24□□□□□ -0.61
SGCE-203ENST00000425444 LYZL6O75951 148 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 IGHV3-9P01782 118 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 IMPDH2P12268 514 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 BMP2P12643 396 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 MAP2K6P52564 334 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 ATP5J2P56134 94 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 CDK6Q00534 326 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 ITGADQ13349 1161 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 PDK3Q15120 406 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 ZNF704Q6ZNC4 412 aaPredicted RBP11.24□□□□□ -0.61
SGCE-203ENST00000425444 DHDDSQ86SQ9 333 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 SERPINA11Q86U17 422 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 LSRQ86X29 649 aaPredicted RBP11.24□□□□□ -0.61
SGCE-203ENST00000425444 KRT73Q86Y46 540 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 CLIP4Q8N3C7 705 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 STON2Q8WXE9 905 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 APH1AQ96BI3 265 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 TAPBPLQ9BX59 468 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 POTEKPQ9BYX7 375 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 BCL2L10Q9HD36 194 aa11.24□□□□□ -0.61
SGCE-203ENST00000425444 NGBQ9NPG2 151 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms