RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 POMGNT2Q8NAT1 580 aa5.36□□□□□ -1.55
SDCBP-203ENST00000424270 STAG3L4Q8TBR4 150 aa5.36□□□□□ -1.55
SDCBP-203ENST00000424270 SSMEM1Q8WWF3 244 aa5.36□□□□□ -1.55
SDCBP-203ENST00000424270 FAM71F1Q96KD3 344 aaPredicted RBP5.36□□□□□ -1.55
SDCBP-203ENST00000424270 ALKBH3Q96Q83 286 aaPredicted RBP5.36□□□□□ -1.55
SDCBP-203ENST00000424270 DIRC2Q96SL1 478 aa5.36□□□□□ -1.55
SDCBP-203ENST00000424270 KLHDC3Q9BQ90 382 aa5.36□□□□□ -1.55
SDCBP-203ENST00000424270 NAA11Q9BSU3 229 aaPredicted RBP5.36□□□□□ -1.55
SDCBP-203ENST00000424270 IPPKQ9H8X2 491 aa5.36□□□□□ -1.55
SDCBP-203ENST00000424270 NANOGQ9H9S0 305 aa5.36□□□□□ -1.55
SDCBP-203ENST00000424270 CAB39LQ9H9S4 337 aa5.36□□□□□ -1.55
SDCBP-203ENST00000424270 SAP30LQ9HAJ7 183 aa5.36□□□□□ -1.55
SDCBP-203ENST00000424270 HINT3Q9NQE9 182 aaKnown RBP5.36□□□□□ -1.55
SDCBP-203ENST00000424270 SLC35C2Q9NQQ7 365 aa5.36□□□□□ -1.55
SDCBP-203ENST00000424270 NMRK1Q9NWW6 199 aa5.36□□□□□ -1.55
SDCBP-203ENST00000424270 TAAR3PQ9P1P4 343 aa5.36□□□□□ -1.55
SDCBP-203ENST00000424270 TXNDC16Q9P2K2 825 aa5.36□□□□□ -1.55
SDCBP-203ENST00000424270 NFU1Q9UMS0 254 aa5.36□□□□□ -1.55
SDCBP-203ENST00000424270 INSIG2Q9Y5U4 225 aa5.36□□□□□ -1.55
SDCBP-203ENST00000424270 TET2Q6N021 2002 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-203ENST00000424270 ZNF816-ZNF321PA0A0X1KG74 233 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 SERTM1A2A2V5 107 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 BTBD17A6NE02 478 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 ANKRD61A6NGH8 418 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 H0YL77 283 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 PDLIM1O00151 329 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 BANF1O75531 89 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 NGFRP08138 427 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 SBK2P0C263 348 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 NHLRC4P0CG21 123 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-203ENST00000424270 OR12D1P0DN82 309 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 IGLL1P15814 213 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 CBR1P16152 277 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 ZNF12P17014 697 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 CCNA2P20248 432 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 DRD4P21917 467 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 NR4A1P22736 598 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 ARR3P36575 388 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 CRYBB2P43320 205 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 CCNG1P51959 295 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 SUMO3P55854 103 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-203ENST00000424270 SLC3A1Q07837 685 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 DCTN2Q13561 401 aaKnown RBP5.35□□□□□ -1.55
SDCBP-203ENST00000424270 GTF2H2Q13888 395 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 CBFBQ13951 182 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 E2F2Q14209 437 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 HEPACAMQ14CZ8 416 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 NDUFAF6Q330K2 333 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 C3orf36Q3SXR2 165 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 ESCO2Q56NI9 601 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 SYT14P1Q58G82 188 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 ZBTB37Q5TC79 503 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 FRG2Q64ET8 278 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 GTF2H2CQ6P1K8 395 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 CBLN3Q6UW01 205 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 LRIG3Q6UXM1 1119 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 Q6YL49 198 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 GDPGP1Q6ZNW5 385 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 C9orf139Q6ZV77 190 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 RAPH1Q70E73 1250 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 GPAT4Q86UL3 456 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 LRP11Q86VZ4 500 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 METTL4Q8N3J2 472 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 TMEM86BQ8N661 226 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 C1orf52Q8N6N3 182 aaKnown RBP5.35□□□□□ -1.55
SDCBP-203ENST00000424270 COX18Q8N8Q8 333 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 LRRC57Q8N9N7 239 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 ICA1LQ8NDH6 482 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 IL17RDQ8NFM7 739 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 SLC25A43Q8WUT9 341 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-203ENST00000424270 MAIP1Q8WWC4 291 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 R3HDM4Q96D70 268 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 ELMOD3Q96FG2 381 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 FRG2BQ96QU4 278 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 DCLRE1CQ96SD1 692 aaKnown RBP5.35□□□□□ -1.55
SDCBP-203ENST00000424270 NAT9Q9BTE0 207 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 LMF2Q9BU23 707 aaKnown RBP5.35□□□□□ -1.55
SDCBP-203ENST00000424270 NMUR2Q9GZQ4 415 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 POPDC3Q9HBV1 291 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 MIEF1Q9NQG6 463 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 GIN1Q9NXP7 522 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 MYEF2Q9P2K5 600 aaKnown RBP5.35□□□□□ -1.55
SDCBP-203ENST00000424270 NKX1-2Q9UD57 310 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-203ENST00000424270 C19orf53Q9UNZ5 99 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-203ENST00000424270 TRIM33Q9UPN9 1127 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 CACNG2Q9Y698 323 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 POMT1Q9Y6A1 747 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 PCNX3Q9H6A9 2034 aa5.35□□□□□ -1.55
SDCBP-203ENST00000424270 TENM2Q9NT68 2774 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 A0A087WV62 115 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 ARPC4-TTLL3A0A0A6YYG9 625 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 WI2-2373I1.2A0A1W2PRP0 233 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 TTC36A6NLP5 189 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 SYCE1LA8MT33 242 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 C17orf100A8MU93 164 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 TRIM49D1C9J1S8 452 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 TRAPPC2LH3BP13 241 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 UPK1AO00322 258 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 PCDH7O60245 1069 aa5.34□□□□□ -1.55
SDCBP-203ENST00000424270 UGDHO60701 494 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms