RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 ZNF426Q9BUY5 554 aa16.47■□□□□ 0.23
HDAC6-205ENST00000423941 PTDSS2Q9BVG9 487 aa16.47■□□□□ 0.23
HDAC6-205ENST00000423941 PRRG4Q9BZD6 226 aa16.47■□□□□ 0.23
HDAC6-205ENST00000423941 POLR2J2Q9GZM3 115 aaKnown RBP16.47■□□□□ 0.23
HDAC6-205ENST00000423941 POLR2J3Q9H1A7 115 aaKnown RBP16.47■□□□□ 0.23
HDAC6-205ENST00000423941 PIGMQ9H3S5 423 aa16.47■□□□□ 0.23
HDAC6-205ENST00000423941 BCO1Q9HAY6 547 aa16.47■□□□□ 0.23
HDAC6-205ENST00000423941 CHST11Q9NPF2 352 aa16.47■□□□□ 0.23
HDAC6-205ENST00000423941 NPDC1Q9NQX5 325 aaPredicted RBP16.47■□□□□ 0.23
HDAC6-205ENST00000423941 RPS6KB2Q9UBS0 482 aa16.47■□□□□ 0.23
HDAC6-205ENST00000423941 PACSIN3Q9UKS6 424 aa16.47■□□□□ 0.23
HDAC6-205ENST00000423941 CRYBG3Q68DQ2 2970 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 A8MXE2 369 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 FTCDNL1E5RQL4 147 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 MSTNO14793 375 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 GSTA4O15217 222 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 CHP2O43745 196 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 PRKD3O94806 890 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 UBOX5O94941 541 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 CD8BP10966 210 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 NCK1P16333 377 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 TNFRSF1BP20333 461 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 ASCL1P50553 236 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 NCALDP61601 193 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 C1orf140Q5VVS0 124 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 SP5Q6BEB4 398 aaPredicted RBP16.46■□□□□ 0.23
HDAC6-205ENST00000423941 ABLIM2Q6H8Q1 611 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 VWA1Q6PCB0 445 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 OR6S1Q8NH40 331 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 MFSD8Q8NHS3 518 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 VANGL1Q8TAA9 524 aaPredicted RBP16.46■□□□□ 0.23
HDAC6-205ENST00000423941 ABHD3Q8WU67 409 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 LZICQ8WZA0 190 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 PSD2Q9BQI7 771 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 TMEM43Q9BTV4 400 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 DCAF13Q9NV06 445 aaKnown RBP16.46■□□□□ 0.23
HDAC6-205ENST00000423941 ADPRHL2Q9NX46 363 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 EGFL7Q9UHF1 273 aa16.46■□□□□ 0.23
HDAC6-205ENST00000423941 IGKV3D-15A0A087WSY6 115 aa16.45■□□□□ 0.22
HDAC6-205ENST00000423941 TRAPPC13A5PLN9 417 aa16.45■□□□□ 0.22
HDAC6-205ENST00000423941 ELOA3DA6NLF2 546 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-205ENST00000423941 FAM90A27PA6NNH2 459 aa16.45■□□□□ 0.22
HDAC6-205ENST00000423941 ZNF716A6NP11 495 aa16.45■□□□□ 0.22
HDAC6-205ENST00000423941 ZNF814B7Z6K7 855 aa16.45■□□□□ 0.22
HDAC6-205ENST00000423941 PRSS44E7EML9 344 aa16.45■□□□□ 0.22
HDAC6-205ENST00000423941 EIF1BO60739 113 aaKnown RBP16.45■□□□□ 0.22
HDAC6-205ENST00000423941 FPR1P21462 350 aa16.45■□□□□ 0.22
HDAC6-205ENST00000423941 IDUAP35475 653 aa16.45■□□□□ 0.22
HDAC6-205ENST00000423941 OR1E2P47887 323 aa16.45■□□□□ 0.22
HDAC6-205ENST00000423941 SLC16A1P53985 500 aa16.45■□□□□ 0.22
HDAC6-205ENST00000423941 SLC35A1P78382 337 aa16.45■□□□□ 0.22
HDAC6-205ENST00000423941 MXRA7P84157 204 aa16.45■□□□□ 0.22
HDAC6-205ENST00000423941 ELOA3BQ3SY89 546 aa16.45■□□□□ 0.22
HDAC6-205ENST00000423941 PAQR6Q6TCH4 344 aa16.45■□□□□ 0.22
HDAC6-205ENST00000423941 FAM156AQ8NDB6 213 aa16.45■□□□□ 0.22
HDAC6-205ENST00000423941 ELOA3Q8NG57 546 aa16.45■□□□□ 0.22
HDAC6-205ENST00000423941 OR6K3Q8NGY3 331 aa16.45■□□□□ 0.22
HDAC6-205ENST00000423941 PRSS27Q9BQR3 290 aa16.45■□□□□ 0.22
HDAC6-205ENST00000423941 IGHV3-15A0A0B4J1V0 119 aa16.44■□□□□ 0.22
HDAC6-205ENST00000423941 ZNF724A8MTY0 619 aa16.44■□□□□ 0.22
HDAC6-205ENST00000423941 SERPINA1P01009 418 aa16.44■□□□□ 0.22
HDAC6-205ENST00000423941 GPIP06744 558 aa16.44■□□□□ 0.22
HDAC6-205ENST00000423941 YES1P07947 543 aa16.44■□□□□ 0.22
HDAC6-205ENST00000423941 AGTR1P30556 359 aa16.44■□□□□ 0.22
HDAC6-205ENST00000423941 P2RY4P51582 365 aa16.44■□□□□ 0.22
HDAC6-205ENST00000423941 OR2B6P58173 313 aa16.44■□□□□ 0.22
HDAC6-205ENST00000423941 WDR88Q6ZMY6 472 aa16.44■□□□□ 0.22
HDAC6-205ENST00000423941 TSEN54Q7Z6J9 526 aaKnown RBP16.44■□□□□ 0.22
HDAC6-205ENST00000423941 VTCN1Q7Z7D3 282 aa16.44■□□□□ 0.22
HDAC6-205ENST00000423941 SLC7A6OSQ96CW6 309 aaPredicted RBP16.44■□□□□ 0.22
HDAC6-205ENST00000423941 KTI12Q96EK9 354 aaPredicted RBP16.44■□□□□ 0.22
HDAC6-205ENST00000423941 TPD52L3Q96J77 140 aa16.44■□□□□ 0.22
HDAC6-205ENST00000423941 MPP4Q96JB8 637 aa16.44■□□□□ 0.22
HDAC6-205ENST00000423941 SPOCK3Q9BQ16 436 aa16.44■□□□□ 0.22
HDAC6-205ENST00000423941 TACO1Q9BSH4 297 aaKnown RBP16.44■□□□□ 0.22
HDAC6-205ENST00000423941 AMBRA1Q9C0C7 1298 aa16.44■□□□□ 0.22
HDAC6-205ENST00000423941 KLHL9Q9P2J3 617 aa16.44■□□□□ 0.22
HDAC6-205ENST00000423941 KLHL13Q9P2N7 655 aa16.44■□□□□ 0.22
HDAC6-205ENST00000423941 MAGEL2Q9UJ55 1249 aa16.44■□□□□ 0.22
HDAC6-205ENST00000423941 FOXD3Q9UJU5 478 aaPredicted RBP16.44■□□□□ 0.22
HDAC6-205ENST00000423941 CLEC4AQ9UMR7 237 aa16.44■□□□□ 0.22
HDAC6-205ENST00000423941 PRPF19Q9UMS4 504 aaKnown RBP16.44■□□□□ 0.22
HDAC6-205ENST00000423941 HECTD1Q9ULT8 2610 aa16.44■□□□□ 0.22
HDAC6-205ENST00000423941 CELSR2Q9HCU4 2923 aa16.43■□□□□ 0.22
HDAC6-205ENST00000423941 FREM1Q5H8C1 2179 aa16.43■□□□□ 0.22
HDAC6-205ENST00000423941 CPSF4LA6NMK7 179 aaKnown RBP16.43■□□□□ 0.22
HDAC6-205ENST00000423941 OR2T1O43869 369 aa16.43■□□□□ 0.22
HDAC6-205ENST00000423941 RAMP1O60894 148 aa16.43■□□□□ 0.22
HDAC6-205ENST00000423941 THRBP10828 461 aa16.43■□□□□ 0.22
HDAC6-205ENST00000423941 TCN1P20061 433 aaPredicted RBP16.43■□□□□ 0.22
HDAC6-205ENST00000423941 COL8A1P27658 744 aa16.43■□□□□ 0.22
HDAC6-205ENST00000423941 MSX2P35548 267 aaPredicted RBP16.43■□□□□ 0.22
HDAC6-205ENST00000423941 RASGEF1BQ0VAM2 473 aa16.43■□□□□ 0.22
HDAC6-205ENST00000423941 BNIP1Q12981 228 aa16.43■□□□□ 0.22
HDAC6-205ENST00000423941 GDF7Q7Z4P5 450 aa16.43■□□□□ 0.22
HDAC6-205ENST00000423941 CCDC103Q8IW40 242 aa16.43■□□□□ 0.22
HDAC6-205ENST00000423941 TUSC5Q8IXB3 177 aa16.43■□□□□ 0.22
HDAC6-205ENST00000423941 RNASE6Q93091 150 aaKnown RBP16.43■□□□□ 0.22
HDAC6-205ENST00000423941 TAAR8Q969N4 342 aa16.43■□□□□ 0.22
HDAC6-205ENST00000423941 FAM162AQ96A26 154 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms