RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 LILRB1Q8NHL6 650 aaPredicted RBP13.43□□□□□ -0.26
USB1-202ENST00000423271 AKAP1Q92667 903 aaKnown RBP eCLIP13.43□□□□□ -0.26
USB1-202ENST00000423271 Q96MF0 132 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 CGREF1Q99674 301 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 RAD21L1Q9H4I0 556 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 MTHFD2LQ9H903 347 aaPredicted RBP13.43□□□□□ -0.26
USB1-202ENST00000423271 RLIMQ9NVW2 624 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 P2RX2Q9UBL9 471 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 OSGIN1Q9UJX0 560 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 ARL2BPQ9Y2Y0 163 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 TMED7Q9Y3B3 224 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 HDGFL3Q9Y3E1 203 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 GMEB1Q9Y692 573 aa13.43□□□□□ -0.26
USB1-202ENST00000423271 DSPPQ9NZW4 1301 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 ZC3H12DA2A288 527 aaKnown RBP13.42□□□□□ -0.26
USB1-202ENST00000423271 CFAP73A6NFT4 308 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 BBIP1A8MTZ0 92 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 CLOCKO15516 846 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 BCHEP06276 602 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 INHBBP09529 407 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 GKN3PP0CG01 181 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 IMPDH2P12268 514 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 COX4I1P13073 169 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 HOXB4P17483 251 aaPredicted RBP13.42□□□□□ -0.26
USB1-202ENST00000423271 COX5AP20674 150 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 NTF4P34130 210 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 HTR3AP46098 478 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 PTH2RP49190 550 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 POLR2HP52434 150 aaKnown RBP13.42□□□□□ -0.26
USB1-202ENST00000423271 OR2B6P58173 313 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 FADDQ13158 208 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 CYLC2Q14093 348 aaPredicted RBP13.42□□□□□ -0.26
USB1-202ENST00000423271 SELPLGQ14242 412 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 PDK3Q15120 406 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 STK11Q15831 433 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 TRMT5Q32P41 509 aaKnown RBP13.42□□□□□ -0.26
USB1-202ENST00000423271 COQ5Q5HYK3 327 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 NCMAPQ5T1S8 102 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 Q71RC1 249 aaPredicted RBP13.42□□□□□ -0.26
USB1-202ENST00000423271 BIVMQ86UB2 503 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 CCDC103Q8IW40 242 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 ZNF100Q8IYN0 542 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 ZNF611Q8N823 705 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 HSD17B8Q92506 261 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 NEUROG1Q92886 237 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 ZHX1-C8orf76Q96EF9 292 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 ANKRD27Q96NW4 1050 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 GSX2Q9BZM3 304 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 EMC3Q9P0I2 261 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 RNF115Q9Y4L5 304 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 ZANQ9Y493 2812 aa13.42□□□□□ -0.26
USB1-202ENST00000423271 CDHR4A6H8M9 788 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 TRIM64A6NGJ6 449 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 TRIM64BA6NI03 449 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 H7C1Q1 480 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 FXYD1O00168 92 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 FAAHO00519 579 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 TFPTP0C1Z6 253 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 BMP2P12643 396 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 GPX2P18283 190 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 SLC1A3P43003 542 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 CLK1P49759 484 aaKnown RBP13.41□□□□□ -0.26
USB1-202ENST00000423271 MTPNP58546 118 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 BSPH1Q075Z2 132 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 GNA13Q14344 377 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 LIN52Q52LA3 116 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 PEX5LQ8IYB4 626 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 KBTBD8Q8NFY9 601 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 OR52P1PQ8NH57 321 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 RP9Q8TA86 221 aaKnown RBP13.41□□□□□ -0.26
USB1-202ENST00000423271 PIGXQ8TBF5 258 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 SLC38A5Q8WUX1 472 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 TMEM171Q8WVE6 324 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 PMM1Q92871 262 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 MAL2Q969L2 176 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 RCN3Q96D15 328 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 TMEM19Q96HH6 336 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 COX4I2Q96KJ9 171 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 THUMPD1Q9NXG2 353 aaKnown RBP13.41□□□□□ -0.26
USB1-202ENST00000423271 TMEM181Q9P2C4 612 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 ZNF443Q9Y2A4 671 aaPredicted RBP13.41□□□□□ -0.26
USB1-202ENST00000423271 NOSIPQ9Y314 301 aaKnown RBP13.41□□□□□ -0.26
USB1-202ENST00000423271 CHST2Q9Y4C5 530 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 CSPG4Q6UVK1 2322 aa13.41□□□□□ -0.26
USB1-202ENST00000423271 FN1P02751 2386 aaKnown RBP13.4□□□□□ -0.26
USB1-202ENST00000423271 DPRXA6NFQ7 191 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 EVPLLA8MZ36 301 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 ZNF208O43345 1280 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 DNPH1O43598 174 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 FAM107AO95990 144 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 CD3EP07766 207 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 PRG2P13727 222 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 FKBP2P26885 142 aaKnown RBP13.4□□□□□ -0.26
USB1-202ENST00000423271 ACAA2P42765 397 aaKnown RBP13.4□□□□□ -0.26
USB1-202ENST00000423271 SLC16A1P53985 500 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 CRISP3P54108 245 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 FOXG1P55316 489 aaPredicted RBP13.4□□□□□ -0.26
USB1-202ENST00000423271 H3F3AP84243 136 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 PPA1Q15181 289 aa13.4□□□□□ -0.26
USB1-202ENST00000423271 GCNT6Q5T4J0 391 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms