RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 MRM1Q6IN84 353 aaKnown RBP15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 ZC3H14Q6PJT7 736 aaKnown RBP15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 NAXDQ8IW45 347 aa15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 CDH26Q8IXH8 852 aa15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 SP7Q8TDD2 431 aaPredicted RBP15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 STK35Q8TDR2 534 aa15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 TCEAL4Q96EI5 215 aa15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 ZNF681Q96N22 645 aa15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 SLC6A15Q9H2J7 730 aa15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 MEPEQ9NQ76 525 aaPredicted RBP15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 SPHK2Q9NRA0 654 aa15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 MRTO4Q9UKD2 239 aaKnown RBP15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 PRELID3BQ9Y3B1 194 aa15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 GOSR2O14653 212 aa15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 TGM5O43548 720 aa15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 RCBTB2O95199 551 aa15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 ZNF3P17036 446 aa15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 SNRPNP63162 240 aaKnown RBP15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 RIPPLY1Q0D2K3 151 aa15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 UBXN2BQ14CS0 331 aa15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 ZNF613Q6PF04 617 aa15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 DEFB128Q7Z7B8 93 aa15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 LRIG1Q96JA1 1093 aa15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 FBXO34Q9NWN3 711 aa15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 MED11Q9P086 117 aa15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 OR5V1Q9UGF6 321 aa15.35■□□□□ 0.05
NPC1L1-203ENST00000423141 SCN2AQ99250 2005 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 ANKRD61A6NGH8 418 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 HMSDA8MTL9 139 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 SNRPGP15A8MWD9 76 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 ITGA10O75578 1167 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 ACTC1P68032 377 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 ACTA1P68133 377 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 PLA2G7Q13093 441 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 CBFBQ13951 182 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 DUSP5Q16690 384 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 MFSD12Q6NUT3 480 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 SDR9C7Q8NEX9 313 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 ZNRF4Q8WWF5 429 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 ARRDC3Q96B67 414 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 LGR4Q9BXB1 951 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 MTHFD2LQ9H903 347 aaPredicted RBP15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 PEX12O00623 359 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 LATO43561 262 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 IL5P05113 134 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 DLX5P56178 289 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 B2MP61769 119 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 PWWP2BQ6NUJ5 590 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 NUDT18Q6ZVK8 323 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 RANBP3LQ86VV4 465 aaPredicted RBP15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 EIF4E3Q8N5X7 224 aaKnown RBP15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 OR2A1Q8NGT9 310 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 GRHL3Q8TE85 626 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 SNX33Q8WV41 574 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 TNFRSF13CQ96RJ3 184 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 C2orf42Q9NWW7 574 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 GMEB2Q9UKD1 530 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 MOKQ9UQ07 419 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 WNT6Q9Y6F9 365 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 SPTBP11277 2137 aa15.34■□□□□ 0.05
NPC1L1-203ENST00000423141 TMEM272A0A1B0GTI8 110 aa15.33■□□□□ 0.05
NPC1L1-203ENST00000423141 IMPA2O14732 288 aa15.33■□□□□ 0.05
NPC1L1-203ENST00000423141 LRG1P02750 347 aa15.33■□□□□ 0.05
NPC1L1-203ENST00000423141 RLN1P04808 185 aa15.33■□□□□ 0.05
NPC1L1-203ENST00000423141 PRDX1Q06830 199 aaKnown RBP15.33■□□□□ 0.05
NPC1L1-203ENST00000423141 IL10RAQ13651 578 aa15.33■□□□□ 0.05
NPC1L1-203ENST00000423141 MRPL2Q5T653 305 aaKnown RBP15.33■□□□□ 0.05
NPC1L1-203ENST00000423141 LSM14AQ8ND56 463 aaKnown RBP15.33■□□□□ 0.05
NPC1L1-203ENST00000423141 DNAAF1Q8NEP3 725 aa15.33■□□□□ 0.05
NPC1L1-203ENST00000423141 OR4D10Q8NGI6 311 aa15.33■□□□□ 0.05
NPC1L1-203ENST00000423141 OR4K13Q8NH42 304 aa15.33■□□□□ 0.05
NPC1L1-203ENST00000423141 ZNF559Q9BR84 538 aa15.33■□□□□ 0.05
NPC1L1-203ENST00000423141 UTP23Q9BRU9 249 aaKnown RBP15.33■□□□□ 0.05
NPC1L1-203ENST00000423141 PCBD2Q9H0N5 130 aa15.33■□□□□ 0.05
NPC1L1-203ENST00000423141 KCNE5Q9UJ90 142 aa15.33■□□□□ 0.05
NPC1L1-203ENST00000423141 HCFC2Q9Y5Z7 792 aa15.33■□□□□ 0.05
NPC1L1-203ENST00000423141 FNTBP49356 437 aa15.33■□□□□ 0.04
NPC1L1-203ENST00000423141 SORDQ00796 357 aa15.33■□□□□ 0.04
NPC1L1-203ENST00000423141 MESP2Q0VG99 397 aa15.33■□□□□ 0.04
NPC1L1-203ENST00000423141 ZIC1Q15915 447 aa15.33■□□□□ 0.04
NPC1L1-203ENST00000423141 SLC36A1Q7Z2H8 476 aa15.33■□□□□ 0.04
NPC1L1-203ENST00000423141 OR4N5Q8IXE1 308 aa15.33■□□□□ 0.04
NPC1L1-203ENST00000423141 MUC20Q8N307 709 aaPredicted RBP15.33■□□□□ 0.04
NPC1L1-203ENST00000423141 OR52E2Q8NGJ4 325 aa15.33■□□□□ 0.04
NPC1L1-203ENST00000423141 S100A16Q96FQ6 103 aaKnown RBP15.33■□□□□ 0.04
NPC1L1-203ENST00000423141 GPR174Q9BXC1 333 aa15.33■□□□□ 0.04
NPC1L1-203ENST00000423141 RNF186Q9NXI6 227 aa15.33■□□□□ 0.04
NPC1L1-203ENST00000423141 HAO2Q9NYQ3 351 aa15.33■□□□□ 0.04
NPC1L1-203ENST00000423141 ZNF98A6NK75 572 aa15.32■□□□□ 0.04
NPC1L1-203ENST00000423141 F5H5P2 479 aa15.32■□□□□ 0.04
NPC1L1-203ENST00000423141 RPL35P42766 123 aaKnown RBP15.32■□□□□ 0.04
NPC1L1-203ENST00000423141 TMEM35AQ53FP2 167 aa15.32■□□□□ 0.04
NPC1L1-203ENST00000423141 SLC39A11Q8N1S5 342 aa15.32■□□□□ 0.04
NPC1L1-203ENST00000423141 SLC25A28Q96A46 364 aa15.32■□□□□ 0.04
NPC1L1-203ENST00000423141 MFRPQ9BY79 579 aa15.32■□□□□ 0.04
NPC1L1-203ENST00000423141 PBX4Q9BYU1 374 aa15.32■□□□□ 0.04
NPC1L1-203ENST00000423141 TSPAN10Q9H1Z9 355 aaPredicted RBP15.32■□□□□ 0.04
NPC1L1-203ENST00000423141 ABT1Q9ULW3 272 aaKnown RBP15.32■□□□□ 0.04
NPC1L1-203ENST00000423141 ZNF780BQ9Y6R6 833 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms