RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 NXPE2Q96DL1 559 aa5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 NEURL3Q96EH8 262 aa5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 AURKBQ96GD4 344 aaPredicted RBP5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 MAGED4Q96JG8 741 aa5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 ART5Q96L15 291 aa5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 RAD21L1Q9H4I0 556 aa5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 IKZF5Q9H5V7 419 aa5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 KAT8Q9H7Z6 458 aaKnown RBP5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 ANKRA2Q9H9E1 313 aa5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 ZCCHC3Q9NUD5 404 aaKnown RBP5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 DDX18Q9NVP1 670 aaKnown RBP5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 CMTM6Q9NX76 183 aa5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 ADA2Q9NZK5 511 aa5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 TMEM181Q9P2C4 612 aa5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 ABCD2Q9UBJ2 740 aa5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 C19orf25Q9UFG5 118 aaPredicted RBP5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 ZNF639Q9UID6 485 aa5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 PRPF19Q9UMS4 504 aaKnown RBP5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 A4GNTQ9UNA3 340 aa5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 AP3M1Q9Y2T2 418 aa5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 L3MBTL1Q9Y468 752 aa5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 SCN2AQ99250 2005 aa5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 NUP214P35658 2090 aaPredicted RBP5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 SDK2Q58EX2 2172 aa5.36□□□□□ -1.55
NIFKP3-201ENST00000417799 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 LOC102723996A0A087X1L8 192 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 IGHV3-20A0A0C4DH32 117 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 SAGE2PA6NJ88 616 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 TTC36A6NLP5 189 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 NME4O00746 187 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 SOCS6O14544 535 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 TIPRLO75663 272 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 PSMG1O95456 288 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 SCGB1D1O95968 90 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 CLPSP04118 112 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 IGKV3-11P04433 115 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 HMGN2P05204 90 aaKnown RBP5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 HSD17B1P14061 328 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 GPX2P18283 190 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 EDN2P20800 178 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 TTKP33981 857 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 CRATP43155 626 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 EMDP50402 254 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 GZMMP51124 257 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 GPR143P51810 404 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 CASP9P55211 416 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 RPS18P62269 152 aaKnown RBP5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 SSBP2P81877 361 aaPredicted RBP5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 ARF1P84077 181 aaKnown RBP5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 LIPEQ05469 1076 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 KRTAP1-1Q07627 177 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 FADDQ13158 208 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 EXOSC7Q15024 291 aaKnown RBP5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 RGNQ15493 299 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 PIGGQ5H8A4 983 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 SAMD4BQ5PRF9 694 aaKnown RBP5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 ZCCHC12Q6PEW1 402 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 PAPD4Q6PIY7 484 aaKnown RBP5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 ANGPTL8Q6UXH0 198 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 NDUFAF7Q7L592 441 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 SZRD1Q7Z422 152 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 CALHM3Q86XJ0 350 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 FBXW8Q8N3Y1 598 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 ZNF615Q8N8J6 731 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 NFAM1Q8NET5 270 aaPredicted RBP5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 OR52R1Q8NGF1 315 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 OR10A6Q8NH74 314 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 C16orf52Q8NHV5 167 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 PNPT1Q8TCS8 783 aaKnown RBP5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 MIPOL1Q8TD10 442 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 ZNF721Q8TF20 911 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 NCLNQ969V3 563 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 MCUR1Q96AQ8 359 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 KIAA1143Q96AT1 154 aaPredicted RBP5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 C8orf44Q96CB5 159 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 RNF183Q96D59 192 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 GIMAP5Q96F15 307 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 C16orf58Q96GQ5 468 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 SENP5Q96HI0 755 aaPredicted RBP5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 SLC35G5Q96KT7 338 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 ZNF583Q96ND8 569 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 MS4A4EQ96PG1 132 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 LPAR4Q99677 370 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 TREX2Q9BQ50 279 aaPredicted RBP5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 ECSITQ9BQ95 431 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 WDR77Q9BQA1 342 aaPredicted RBP5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 THTPAQ9BU02 230 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 NUDT9Q9BW91 350 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 OR8D2Q9GZM6 311 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 MMADHCQ9H3L0 296 aaPredicted RBP5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 MAP6D1Q9H9H5 199 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 GPN2Q9H9Y4 310 aaPredicted RBP5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 THUMPD1Q9NXG2 353 aaKnown RBP5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 CD300AQ9UGN4 299 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 IL17BQ9UHF5 180 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 BCAP29Q9UHQ4 241 aa5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 FAF1Q9UNN5 650 aaPredicted RBP5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 PPIEQ9UNP9 301 aaKnown RBP5.35□□□□□ -1.55
NIFKP3-201ENST00000417799 ERVK-19Q9WJR5 959 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms