RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 ZNF140P52738 457 aaPredicted RBP18.84■□□□□ 0.61
AP1S3-205ENST00000415298 OR2B8PP59922 312 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 UBALD2Q8IYN6 164 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 PHACTR4Q8IZ21 702 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 DNAJB8Q8NHS0 232 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 ACOT12Q8WYK0 555 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 FAM117AQ9C073 453 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 ZNF69Q9UC07 566 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 MMP17Q9ULZ9 603 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 SAMD4AQ9UPU9 718 aaKnown RBP18.84■□□□□ 0.61
AP1S3-205ENST00000415298 ADAM10O14672 748 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 SOX15O60248 233 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 DIRAS1O95057 198 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 YIF1AO95070 293 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 PMP2P02689 132 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 LPOP22079 712 aaPredicted RBP18.84■□□□□ 0.61
AP1S3-205ENST00000415298 BMI1P35226 326 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 GDNFP39905 211 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 SRP9P49458 86 aaKnown RBP18.84■□□□□ 0.61
AP1S3-205ENST00000415298 MRPS10P82664 201 aaKnown RBP18.84■□□□□ 0.61
AP1S3-205ENST00000415298 EGR3Q06889 387 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 DMRTA1Q5VZB9 504 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 OGFOD3Q6PK18 319 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 LDB1Q86U70 411 aaPredicted RBP18.84■□□□□ 0.61
AP1S3-205ENST00000415298 THOC6Q86W42 341 aaKnown RBP18.84■□□□□ 0.61
AP1S3-205ENST00000415298 SLC35F3Q8IY50 421 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 CDKN2AIPNLQ96HQ2 116 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 MRGPRX1Q96LB2 322 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 OR4K3Q96R72 315 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 LYSMD1Q96S90 227 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 WRAP53Q9BUR4 548 aaKnown RBP18.84■□□□□ 0.61
AP1S3-205ENST00000415298 IL17CQ9P0M4 197 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 FBXL3Q9UKT7 428 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 GSTK1Q9Y2Q3 226 aa18.84■□□□□ 0.61
AP1S3-205ENST00000415298 C1QTNF3-AMACRE9PGA6 284 aa18.83■□□□□ 0.61
AP1S3-205ENST00000415298 M0QZK8 103 aa18.83■□□□□ 0.61
AP1S3-205ENST00000415298 CASKO14936 926 aa18.83■□□□□ 0.61
AP1S3-205ENST00000415298 OPN1LWP04000 364 aa18.83■□□□□ 0.61
AP1S3-205ENST00000415298 FABP3P05413 133 aa18.83■□□□□ 0.61
AP1S3-205ENST00000415298 DCNP07585 359 aaKnown RBP18.83■□□□□ 0.61
AP1S3-205ENST00000415298 SHC1P29353 583 aa18.83■□□□□ 0.61
AP1S3-205ENST00000415298 CDKN1BP46527 198 aa18.83■□□□□ 0.61
AP1S3-205ENST00000415298 TRA2AQ13595 282 aaKnown RBP eCLIP18.83■□□□□ 0.61
AP1S3-205ENST00000415298 C1DQ13901 141 aaKnown RBP18.83■□□□□ 0.61
AP1S3-205ENST00000415298 SLC36A2Q495M3 483 aa18.83■□□□□ 0.61
AP1S3-205ENST00000415298 SLC30A6Q6NXT4 461 aa18.83■□□□□ 0.61
AP1S3-205ENST00000415298 ERN2Q76MJ5 926 aaKnown RBP18.83■□□□□ 0.61
AP1S3-205ENST00000415298 TMEM200AQ86VY9 491 aa18.83■□□□□ 0.61
AP1S3-205ENST00000415298 SYNPOQ8N3V7 929 aa18.83■□□□□ 0.61
AP1S3-205ENST00000415298 OR1S2Q8NGQ3 325 aa18.83■□□□□ 0.61
AP1S3-205ENST00000415298 TCTN2Q96GX1 697 aa18.83■□□□□ 0.61
AP1S3-205ENST00000415298 SHDQ96IW2 340 aa18.83■□□□□ 0.61
AP1S3-205ENST00000415298 C5orf34Q96MH7 638 aa18.83■□□□□ 0.61
AP1S3-205ENST00000415298 CNTNAP3BQ96NU0 1288 aa18.83■□□□□ 0.61
AP1S3-205ENST00000415298 CLCC1Q96S66 551 aa18.83■□□□□ 0.61
AP1S3-205ENST00000415298 CLEC2DQ9UHP7 191 aa18.83■□□□□ 0.61
AP1S3-205ENST00000415298 CD84Q9UIB8 345 aa18.83■□□□□ 0.61
AP1S3-205ENST00000415298 SLC35A3Q9Y2D2 325 aa18.83■□□□□ 0.61
AP1S3-205ENST00000415298 A0A0U1RQV5 110 aa18.83■□□□□ 0.6
AP1S3-205ENST00000415298 A0A1W2PPQ1 181 aa18.83■□□□□ 0.6
AP1S3-205ENST00000415298 TCRBV21S2A2A0A5A6 115 aa18.83■□□□□ 0.6
AP1S3-205ENST00000415298 ESR1P03372 595 aa18.83■□□□□ 0.6
AP1S3-205ENST00000415298 ELK1P19419 428 aa18.83■□□□□ 0.6
AP1S3-205ENST00000415298 PRPS1L1P21108 318 aa18.83■□□□□ 0.6
AP1S3-205ENST00000415298 CDKN1CP49918 316 aaPredicted RBP18.83■□□□□ 0.6
AP1S3-205ENST00000415298 HSD11B2P80365 405 aa18.83■□□□□ 0.6
AP1S3-205ENST00000415298 EOGTQ5NDL2 527 aa18.83■□□□□ 0.6
AP1S3-205ENST00000415298 PIP5KL1Q5T9C9 394 aa18.83■□□□□ 0.6
AP1S3-205ENST00000415298 ABHD13Q7L211 337 aa18.83■□□□□ 0.6
AP1S3-205ENST00000415298 FAM71CQ8NEG0 241 aa18.83■□□□□ 0.6
AP1S3-205ENST00000415298 TMEM203Q969S6 136 aa18.83■□□□□ 0.6
AP1S3-205ENST00000415298 CA10Q9NS85 328 aa18.83■□□□□ 0.6
AP1S3-205ENST00000415298 TTC28Q96AY4 2481 aa18.83■□□□□ 0.6
AP1S3-205ENST00000415298 NDUFS8O00217 210 aa18.82■□□□□ 0.6
AP1S3-205ENST00000415298 EIF4E2O60573 245 aaKnown RBP18.82■□□□□ 0.6
AP1S3-205ENST00000415298 CPN1P15169 458 aa18.82■□□□□ 0.6
AP1S3-205ENST00000415298 NDUFV2P19404 249 aa18.82■□□□□ 0.6
AP1S3-205ENST00000415298 PTPN6P29350 595 aa18.82■□□□□ 0.6
AP1S3-205ENST00000415298 TAS2R38P59533 333 aa18.82■□□□□ 0.6
AP1S3-205ENST00000415298 PSMA6P60900 246 aaKnown RBP18.82■□□□□ 0.6
AP1S3-205ENST00000415298 CTBP1Q13363 440 aa18.82■□□□□ 0.6
AP1S3-205ENST00000415298 SLBPQ14493 270 aaKnown RBP eCLIP18.82■□□□□ 0.6
AP1S3-205ENST00000415298 SCGB2B2Q4G0G5 96 aa18.82■□□□□ 0.6
AP1S3-205ENST00000415298 ZNF776Q68DI1 518 aaPredicted RBP18.82■□□□□ 0.6
AP1S3-205ENST00000415298 HSD11B1LQ7Z5J1 315 aa18.82■□□□□ 0.6
AP1S3-205ENST00000415298 CBARPQ8N350 705 aaPredicted RBP18.82■□□□□ 0.6
AP1S3-205ENST00000415298 PPP1R16AQ96I34 528 aa18.82■□□□□ 0.6
AP1S3-205ENST00000415298 F2RL3Q96RI0 385 aa18.82■□□□□ 0.6
AP1S3-205ENST00000415298 IKZF5Q9H5V7 419 aa18.82■□□□□ 0.6
AP1S3-205ENST00000415298 RERGLQ9H628 205 aa18.82■□□□□ 0.6
AP1S3-205ENST00000415298 SLC25A19Q9HC21 320 aa18.82■□□□□ 0.6
AP1S3-205ENST00000415298 MIEF1Q9NQG6 463 aa18.82■□□□□ 0.6
AP1S3-205ENST00000415298 CTPS2Q9NRF8 586 aa18.82■□□□□ 0.6
AP1S3-205ENST00000415298 NLE1Q9NVX2 485 aaPredicted RBP18.82■□□□□ 0.6
AP1S3-205ENST00000415298 MRPS17Q9Y2R5 130 aaKnown RBP18.82■□□□□ 0.6
AP1S3-205ENST00000415298 GPR55Q9Y2T6 319 aaPredicted RBP18.82■□□□□ 0.6
AP1S3-205ENST00000415298 FXYD6-FXYD2A0A087WZ82 144 aa18.82■□□□□ 0.6
AP1S3-205ENST00000415298 FAM220BPB1ANY3 271 aa18.82■□□□□ 0.6
AP1S3-205ENST00000415298 C1SP09871 688 aa18.82■□□□□ 0.6
AP1S3-205ENST00000415298 ANKRD34CP0C6C1 535 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms