RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 ANXA8L1Q5VT79 327 aa16.9■□□□□ 0.3
UBXN4-202ENST00000415164 AAED1Q7RTV5 226 aa16.9■□□□□ 0.3
UBXN4-202ENST00000415164 SPATA19Q7Z5L4 167 aa16.9■□□□□ 0.3
UBXN4-202ENST00000415164 GPAT4Q86UL3 456 aa16.9■□□□□ 0.3
UBXN4-202ENST00000415164 ANKS4BQ8N8V4 417 aa16.9■□□□□ 0.3
UBXN4-202ENST00000415164 C1orf162Q8NEQ5 155 aaPredicted RBP16.9■□□□□ 0.3
UBXN4-202ENST00000415164 MIPOL1Q8TD10 442 aa16.9■□□□□ 0.3
UBXN4-202ENST00000415164 SORCS2Q96PQ0 1159 aa16.9■□□□□ 0.3
UBXN4-202ENST00000415164 EXOSC3Q9NQT5 275 aaKnown RBP16.9■□□□□ 0.3
UBXN4-202ENST00000415164 OSGIN1Q9UJX0 560 aa16.9■□□□□ 0.3
UBXN4-202ENST00000415164 TRAPPC4Q9Y296 219 aa16.9■□□□□ 0.3
UBXN4-202ENST00000415164 PRSS51A0A1B0GVH4 220 aa16.89■□□□□ 0.29
UBXN4-202ENST00000415164 SLC35F4A4IF30 521 aa16.89■□□□□ 0.29
UBXN4-202ENST00000415164 PDLIM1O00151 329 aa16.89■□□□□ 0.29
UBXN4-202ENST00000415164 HNF1AP20823 631 aa16.89■□□□□ 0.29
UBXN4-202ENST00000415164 MPGP29372 298 aa16.89■□□□□ 0.29
UBXN4-202ENST00000415164 NME5P56597 212 aa16.89■□□□□ 0.29
UBXN4-202ENST00000415164 OR7A5Q15622 319 aa16.89■□□□□ 0.29
UBXN4-202ENST00000415164 FAM120AOSQ5T036 256 aa16.89■□□□□ 0.29
UBXN4-202ENST00000415164 SAXO2Q658L1 398 aa16.89■□□□□ 0.29
UBXN4-202ENST00000415164 NUDCD3Q8IVD9 361 aa16.89■□□□□ 0.29
UBXN4-202ENST00000415164 RIBC1Q8N443 379 aaPredicted RBP16.89■□□□□ 0.29
UBXN4-202ENST00000415164 ANKFN1Q8N957 763 aa16.89■□□□□ 0.29
UBXN4-202ENST00000415164 OR8J2Q8NGG1 315 aa16.89■□□□□ 0.29
UBXN4-202ENST00000415164 ASIC5Q9NY37 505 aa16.89■□□□□ 0.29
UBXN4-202ENST00000415164 ZC3H12DA2A288 527 aaKnown RBP16.88■□□□□ 0.29
UBXN4-202ENST00000415164 ITM2AO43736 263 aa16.88■□□□□ 0.29
UBXN4-202ENST00000415164 AKR7A3O95154 331 aa16.88■□□□□ 0.29
UBXN4-202ENST00000415164 UQCRBP14927 111 aa16.88■□□□□ 0.29
UBXN4-202ENST00000415164 CREB1P16220 341 aa16.88■□□□□ 0.29
UBXN4-202ENST00000415164 NR4A2P43354 598 aa16.88■□□□□ 0.29
UBXN4-202ENST00000415164 PLAURQ03405 335 aa16.88■□□□□ 0.29
UBXN4-202ENST00000415164 CEACAM7Q14002 265 aa16.88■□□□□ 0.29
UBXN4-202ENST00000415164 SLC17A1Q14916 467 aa16.88■□□□□ 0.29
UBXN4-202ENST00000415164 SYPL1Q16563 259 aa16.88■□□□□ 0.29
UBXN4-202ENST00000415164 SPANXN4Q5MJ08 99 aa16.88■□□□□ 0.29
UBXN4-202ENST00000415164 RNF130Q86XS8 419 aa16.88■□□□□ 0.29
UBXN4-202ENST00000415164 TMEM99Q8N816 258 aa16.88■□□□□ 0.29
UBXN4-202ENST00000415164 ZNF781Q8N8C0 355 aa16.88■□□□□ 0.29
UBXN4-202ENST00000415164 EIF1ADQ8N9N8 165 aaKnown RBP16.88■□□□□ 0.29
UBXN4-202ENST00000415164 WDR60Q8WVS4 1066 aa16.88■□□□□ 0.29
UBXN4-202ENST00000415164 OIT3Q8WWZ8 545 aa16.88■□□□□ 0.29
UBXN4-202ENST00000415164 PMM1Q92871 262 aa16.88■□□□□ 0.29
UBXN4-202ENST00000415164 NEURL3Q96EH8 262 aa16.88■□□□□ 0.29
UBXN4-202ENST00000415164 AURKBQ96GD4 344 aaPredicted RBP16.88■□□□□ 0.29
UBXN4-202ENST00000415164 SAP130Q9H0E3 1048 aa16.88■□□□□ 0.29
UBXN4-202ENST00000415164 ANK2Q01484 3957 aa16.88■□□□□ 0.29
UBXN4-202ENST00000415164 PLCE1Q9P212 2302 aa16.87■□□□□ 0.29
UBXN4-202ENST00000415164 PRAMEF27A3QJZ7 478 aa16.87■□□□□ 0.29
UBXN4-202ENST00000415164 ZNF208O43345 1280 aa16.87■□□□□ 0.29
UBXN4-202ENST00000415164 C1QCP02747 245 aa16.87■□□□□ 0.29
UBXN4-202ENST00000415164 IL7RP16871 459 aa16.87■□□□□ 0.29
UBXN4-202ENST00000415164 CXCR1P25024 350 aa16.87■□□□□ 0.29
UBXN4-202ENST00000415164 UBE2NP61088 152 aaKnown RBP16.87■□□□□ 0.29
UBXN4-202ENST00000415164 H3F3AP84243 136 aa16.87■□□□□ 0.29
UBXN4-202ENST00000415164 GNA13Q14344 377 aa16.87■□□□□ 0.29
UBXN4-202ENST00000415164 OR9K2Q8NGE7 335 aa16.87■□□□□ 0.29
UBXN4-202ENST00000415164 PNPT1Q8TCS8 783 aaKnown RBP16.87■□□□□ 0.29
UBXN4-202ENST00000415164 MSI2Q96DH6 328 aaKnown RBP16.87■□□□□ 0.29
UBXN4-202ENST00000415164 FOXN4Q96NZ1 517 aa16.87■□□□□ 0.29
UBXN4-202ENST00000415164 ZNF385AQ96PM9 386 aaKnown RBP16.87■□□□□ 0.29
UBXN4-202ENST00000415164 PRR14Q9BWN1 585 aa16.87■□□□□ 0.29
UBXN4-202ENST00000415164 SVEP1Q4LDE5 3571 aa16.87■□□□□ 0.29
UBXN4-202ENST00000415164 IGHV1-18A0A0C4DH31 117 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 IGHV4-61A0A0C4DH41 118 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 CFAP73A6NFT4 308 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 HMGN4O00479 90 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 LGI1O95970 557 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 TGFAP01135 160 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 GPIP06744 558 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 CHRM4P08173 479 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 GUSBP08236 651 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 NUDT17P0C025 328 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 S100A3P33764 101 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 SLC1A3P43003 542 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 TUBA1BP68363 451 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 TUBA4AP68366 448 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 CHI3L2Q15782 390 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 SWI5Q1ZZU3 235 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 SMU1Q2TAY7 513 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 FAM174BQ3ZCQ3 159 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 PAQR6Q6TCH4 344 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 TUBA1AQ71U36 451 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 ABHD12BQ7Z5M8 362 aaPredicted RBP16.86■□□□□ 0.29
UBXN4-202ENST00000415164 CADM2Q8N3J6 435 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 POMGNT2Q8NAT1 580 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 ALKBH3Q96Q83 286 aaPredicted RBP16.86■□□□□ 0.29
UBXN4-202ENST00000415164 TAPBPLQ9BX59 468 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 TMEM45AQ9NWC5 275 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 ADPRHL2Q9NX46 363 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 LGALS13Q9UHV8 139 aa16.86■□□□□ 0.29
UBXN4-202ENST00000415164 NDUFS8O00217 210 aa16.85■□□□□ 0.29
UBXN4-202ENST00000415164 CRYAAP02489 173 aa16.85■□□□□ 0.29
UBXN4-202ENST00000415164 MYZAPP0CAP1 466 aa16.85■□□□□ 0.29
UBXN4-202ENST00000415164 GKN3PP0CG01 181 aa16.85■□□□□ 0.29
UBXN4-202ENST00000415164 NR2F1P10589 423 aa16.85■□□□□ 0.29
UBXN4-202ENST00000415164 SERPINF1P36955 418 aa16.85■□□□□ 0.29
UBXN4-202ENST00000415164 CLNS1AP54105 237 aaKnown RBP16.85■□□□□ 0.29
UBXN4-202ENST00000415164 LGALS3BPQ08380 585 aa16.85■□□□□ 0.29
UBXN4-202ENST00000415164 BNIP2Q12982 314 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms