RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 PCDH15Q96QU1 1955 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 TMEM131Q92545 1883 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 IGKV1D-42A0A075B6H8 117 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 GSTZ1O43708 216 aaPredicted RBP9.05□□□□□ -0.96
SS18-203ENST00000415083 UBL3O95164 117 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 TMIGD3P0DMS9 266 aaPredicted RBP9.05□□□□□ -0.96
SS18-203ENST00000415083 ADRA2CP18825 462 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 PTH2RP49190 550 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 CLDN12P56749 244 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 POU4F3Q15319 338 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 EIPR1Q53HC9 387 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 CD276Q5ZPR3 534 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 FIGLAQ6QHK4 219 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 COX18Q8N8Q8 333 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 ZNF527Q8NB42 609 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 OR52R1Q8NGF1 315 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 OR52L1Q8NGH7 329 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 ZNF431Q8TF32 576 aaPredicted RBP9.05□□□□□ -0.96
SS18-203ENST00000415083 STACQ99469 402 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 SLC25A18Q9H1K4 315 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 MED28Q9H204 178 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 ADAM30Q9UKF2 790 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 MED31Q9Y3C7 131 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 NUBP2Q9Y5Y2 271 aa9.05□□□□□ -0.96
SS18-203ENST00000415083 A0A1B0GTH9 108 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 BMP7P18075 431 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 SRP54P61011 504 aaKnown RBP9.04□□□□□ -0.96
SS18-203ENST00000415083 CRYZQ08257 329 aaKnown RBP9.04□□□□□ -0.96
SS18-203ENST00000415083 ESCO2Q56NI9 601 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 ZNF613Q6PF04 617 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 ENPP7Q6UWV6 458 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 ZNF782Q6ZMW2 699 aaPredicted RBP9.04□□□□□ -0.96
SS18-203ENST00000415083 NLRC3Q7RTR2 1065 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 RD3Q7Z3Z2 195 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 HMGB4Q8WW32 186 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 NMNAT3Q96T66 252 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 CACNG6Q9BXT2 260 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 SRMSQ9H3Y6 488 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 NOX4Q9NPH5 578 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 B3GNT2Q9NY97 397 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 KLK11Q9UBX7 282 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 NPFFR2Q9Y5X5 522 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 RNF215Q9Y6U7 377 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 OR6C74A6NCV1 312 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 ACOD1A6NK06 481 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 A8MUA0 341 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 FAM171A2A8MVW0 826 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 SHOXO15266 292 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 RCBTB2O95199 551 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 SGCGQ13326 291 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 SERPINA12Q8IW75 414 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 EXD3Q8N9H8 876 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 CDRT4Q8N9R6 151 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 FAM98AQ8NCA5 519 aaKnown RBP9.04□□□□□ -0.96
SS18-203ENST00000415083 SMIM4Q8WVI0 70 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 RASD2Q96D21 266 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 ERMAPQ96PL5 475 aaPredicted RBP9.04□□□□□ -0.96
SS18-203ENST00000415083 DMRTA2Q96SC8 542 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 RBCK1Q9BYM8 510 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 CAPN10Q9HC96 672 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 BRD7Q9NPI1 651 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 ACTR10Q9NZ32 417 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 NCDNQ9UBB6 729 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 MRPS7Q9Y2R9 242 aaKnown RBP9.04□□□□□ -0.96
SS18-203ENST00000415083 IER3IP1Q9Y5U9 82 aa9.04□□□□□ -0.96
SS18-203ENST00000415083 TDRD6O60522 2096 aaKnown RBP9.04□□□□□ -0.96
SS18-203ENST00000415083 DCTN6O00399 190 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 LINC01565O15544 149 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 OIP5O43482 229 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 B3GALT2O43825 422 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 GPR75O95800 540 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 AGR2O95994 175 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 CLPSP04118 112 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 LAMP2P13473 410 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 MST1P26927 711 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 STOMP27105 288 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 GRPRP30550 384 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 GDNFP39905 211 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 VSX2P58304 361 aaPredicted RBP9.03□□□□□ -0.96
SS18-203ENST00000415083 SIRPAP78324 504 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 SUZ12Q15022 739 aaKnown RBP9.03□□□□□ -0.96
SS18-203ENST00000415083 HES5Q5TA89 166 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 PXDC1Q5TGL8 231 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 GPR139Q6DWJ6 353 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 BTN2A1Q7KYR7 527 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 ZNF761Q86XN6 746 aaPredicted RBP9.03□□□□□ -0.96
SS18-203ENST00000415083 GPALPP1Q8IXQ4 340 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 TOMM5Q8N4H5 51 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 LSMEM1Q8N8F7 131 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 OR52I2Q8NH67 350 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 ADAMTS14Q8WXS8 1223 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 TSSK2Q96PF2 358 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 TSPAN10Q9H1Z9 355 aaPredicted RBP9.03□□□□□ -0.96
SS18-203ENST00000415083 DPAGT1Q9H3H5 408 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 LYRM4Q9HD34 91 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 NPDC1Q9NQX5 325 aaPredicted RBP9.03□□□□□ -0.96
SS18-203ENST00000415083 PHF11Q9UIL8 331 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 SPATA2Q9UM82 520 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 CPAMD8Q8IZJ3 1885 aa9.03□□□□□ -0.96
SS18-203ENST00000415083 ALPK2Q86TB3 2170 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms