RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 KDM4DQ6B0I6 523 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 OR5T2Q8NGG2 359 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 CPT1CQ8TCG5 803 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 COG8Q96MW5 612 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 TTTY10Q9BZA0 68 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 PSORS1C1Q9UIG5 152 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 CCDC187A0A096LP49 1063 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 PRR35P0CG20 571 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 DAPP51397 102 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 PRKXP51817 358 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 ZNF836Q6ZNA1 936 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 CPEB2Q7Z5Q1 589 aaKnown RBP11.07□□□□□ -0.64
PTPRF-205ENST00000414879 GRAMD2AQ8IUY3 354 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 STT3BQ8TCJ2 826 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 WDR76Q9H967 626 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 TRAV27A0A087WT01 109 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 EEF1E1O43324 174 aaKnown RBP11.07□□□□□ -0.64
PTPRF-205ENST00000414879 BCAS1O75363 584 aaPredicted RBP11.07□□□□□ -0.64
PTPRF-205ENST00000414879 SORBS2O94875 1100 aaKnown RBP11.07□□□□□ -0.64
PTPRF-205ENST00000414879 CSN2P05814 226 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 CYCSP99999 105 aaKnown RBP11.07□□□□□ -0.64
PTPRF-205ENST00000414879 MEF2DQ14814 521 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 TP53I3Q53FA7 332 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 MUCL1Q96DR8 90 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 MSLNLQ96KJ4 702 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 KATNB1Q9BVA0 655 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 V9GY05 133 aa11.07□□□□□ -0.64
PTPRF-205ENST00000414879 SCN1AP35498 2009 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 CDC14CA4D256 554 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 TMPRSS11DO60235 418 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 H2AFB2P0C5Z0 115 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 POU3F4P49335 361 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 ECH1Q13011 328 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 H1FNTQ75WM6 255 aaPredicted RBP11.06□□□□□ -0.64
PTPRF-205ENST00000414879 TMED4Q7Z7H5 227 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 SLC35B4Q969S0 331 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 LRRC61Q9BV99 259 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 FARSAQ9Y285 508 aaKnown RBP11.06□□□□□ -0.64
PTPRF-205ENST00000414879 ADAM18Q9Y3Q7 739 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 SBF1O95248 1867 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 FRG2CA6NGY1 282 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 H7C417 338 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 J3QRK9 145 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 PRH1P02810 166 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 MAS1P04201 325 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 LCKP06239 509 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 SSTR4P31391 388 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 EMX1Q04741 257 aaPredicted RBP11.06□□□□□ -0.64
PTPRF-205ENST00000414879 DUSP5Q16690 384 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 COX20Q5RI15 118 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 FCRL6Q6DN72 434 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 DGLUCYQ7Z3D6 616 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 CENPSQ8N2Z9 138 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 TRMT10AQ8TBZ6 339 aaKnown RBP11.06□□□□□ -0.64
PTPRF-205ENST00000414879 DHRS1Q96LJ7 313 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 NELFAQ9H3P2 528 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 LHX6Q9UPM6 363 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 COL11A1P12107 1806 aaPredicted RBP11.06□□□□□ -0.64
PTPRF-205ENST00000414879 A6NHS1 94 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 AGAP14A8MT82 685 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 HMGN4O00479 90 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 CREBL2O60519 120 aaPredicted RBP11.06□□□□□ -0.64
PTPRF-205ENST00000414879 LPLP06858 475 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 SBK3P0C264 359 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 ABOP16442 354 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 ZNF26P17031 533 aaPredicted RBP11.06□□□□□ -0.64
PTPRF-205ENST00000414879 GRPRP30550 384 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 C1orf140Q5VVS0 124 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 OR6T1Q8NGN1 323 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 OR13C2Q8NGS9 318 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 MUL1Q969V5 352 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 ALG12Q9BV10 488 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 UCK1Q9HA47 277 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 ZNF701Q9NV72 531 aaPredicted RBP11.06□□□□□ -0.64
PTPRF-205ENST00000414879 B3GNT3Q9Y2A9 372 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 TMEM269A0A1B0GVZ9 245 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 NAGAP17050 411 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 MAGEA2P43356 314 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 EMP3P54852 163 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 CARD18P57730 90 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 SELENBP1Q13228 472 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 GNMTQ14749 295 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 CDK10Q15131 360 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 LRRC28Q86X40 367 aaPredicted RBP11.06□□□□□ -0.64
PTPRF-205ENST00000414879 MFSD8Q8NHS3 518 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 RHOXF1Q8NHV9 184 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 KCNE4Q8WWG9 221 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 SNAPC3Q92966 411 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 FAM210AQ96ND0 272 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 SORCS2Q96PQ0 1159 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 AMBRA1Q9C0C7 1298 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 TMEM185BQ9H7F4 350 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 SLAMF7Q9NQ25 335 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 A3GALT2U3KPV4 340 aa11.06□□□□□ -0.64
PTPRF-205ENST00000414879 A0A0A6YYD5 115 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 BORCS7-ASMTA0A0B4J1R7 106 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 CD53P19397 219 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 MAOAP21397 527 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 NTRK2Q16620 822 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 CDNFQ49AH0 187 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms