RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 STX1BP61266 288 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 RPL38P63173 70 aaKnown RBP8.35□□□□□ -1.07
RFFL-203ENST00000413582 POU6F2P78424 691 aaPredicted RBP8.35□□□□□ -1.07
RFFL-203ENST00000413582 KRT72Q14CN4 511 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 QPRTQ15274 297 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 CARTPTQ16568 116 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 RFTN2Q52LD8 501 aaPredicted RBP8.35□□□□□ -1.07
RFFL-203ENST00000413582 NOXRED1Q6NXP6 359 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 ZCCHC12Q6PEW1 402 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 UBE2J2Q8N2K1 259 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 FITM2Q8N6M3 262 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 WDR31Q8NA23 367 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 SGMS2Q8NHU3 365 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 ZFP28Q8NHY6 868 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 TSPEARQ8WU66 669 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 ZFAND2BQ8WV99 257 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 JADE3Q92613 823 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 FBXO17Q96EF6 278 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 MUS81Q96NY9 551 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 BTBD2Q9BX70 525 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 BHLHE41Q9C0J9 482 aaPredicted RBP8.35□□□□□ -1.07
RFFL-203ENST00000413582 NMUR2Q9GZQ4 415 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 DUSP22Q9NRW4 184 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 ASB6Q9NWX5 421 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 GIN1Q9NXP7 522 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 EMC3Q9P0I2 261 aa8.35□□□□□ -1.07
RFFL-203ENST00000413582 E9PBE3 544 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 NPIPB9F8W1W9 429 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 H3BNH8 94 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 TBX19O60806 448 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 PEX11AO75192 247 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 SDC1P18827 310 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 MNAT1P51948 309 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 SNRPD2P62316 118 aaKnown RBP8.34□□□□□ -1.07
RFFL-203ENST00000413582 PDE7AQ13946 482 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 PDK3Q15120 406 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 MAPRE2Q15555 327 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 ZSCAN26Q16670 478 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 GALNTL6Q49A17 601 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 PDCD4Q53EL6 469 aaKnown RBP8.34□□□□□ -1.07
RFFL-203ENST00000413582 OR7E24Q6IFN5 339 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 TMPPEQ6ZT21 453 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 SLC46A3Q7Z3Q1 461 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 C17orf78Q8N4C9 275 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 TMCO5AQ8N6Q1 288 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 FNDC5Q8NAU1 212 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 ZNF527Q8NB42 609 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 GLB1L3Q8NCI6 653 aaPredicted RBP8.34□□□□□ -1.07
RFFL-203ENST00000413582 OR52E4Q8NGH9 312 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 OR5W2Q8NH69 310 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 CDS1Q92903 461 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 CMTM5Q96DZ9 223 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 FAM120BQ96EK7 910 aaKnown RBP8.34□□□□□ -1.07
RFFL-203ENST00000413582 PPP1R36Q96LQ0 422 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 STACQ99469 402 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 CCDC106Q9BWC9 280 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 QRSL1Q9H0R6 528 aaKnown RBP8.34□□□□□ -1.07
RFFL-203ENST00000413582 SLC17A5Q9NRA2 495 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 SDR39U1Q9NRG7 319 aaPredicted RBP8.34□□□□□ -1.07
RFFL-203ENST00000413582 SIRT3Q9NTG7 399 aaPredicted RBP8.34□□□□□ -1.07
RFFL-203ENST00000413582 ACSS1Q9NUB1 689 aaPredicted RBP8.34□□□□□ -1.07
RFFL-203ENST00000413582 AIG1Q9NVV5 245 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 ZIM2Q9NZV7 527 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 TMEFF2Q9UIK5 374 aaPredicted RBP8.34□□□□□ -1.07
RFFL-203ENST00000413582 NOSIPQ9Y314 301 aaKnown RBP8.34□□□□□ -1.07
RFFL-203ENST00000413582 GPR45Q9Y5Y3 372 aa8.34□□□□□ -1.07
RFFL-203ENST00000413582 TRRAPQ9Y4A5 3859 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 A0A0A6YYJ9 748 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 GTPBP1O00178 669 aaKnown RBP8.33□□□□□ -1.08
RFFL-203ENST00000413582 SULT2B1O00204 365 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 DNAJA2O60884 412 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 HMGN2P05204 90 aaKnown RBP8.33□□□□□ -1.08
RFFL-203ENST00000413582 TACSTD2P09758 323 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 UBL4AP11441 157 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 BCKDHAP12694 445 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 EFNA1P20827 205 aaPredicted RBP8.33□□□□□ -1.08
RFFL-203ENST00000413582 ATP6V1C1P21283 382 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 GIFP27352 417 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 APEX1P27695 318 aaKnown RBP8.33□□□□□ -1.08
RFFL-203ENST00000413582 ASMTP46597 345 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 RASSF2P50749 326 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 CCR4P51679 360 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 SLC16A1P53985 500 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 CDH15P55291 814 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 ACTG1P63261 375 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 CSNK2A1P68400 391 aaPredicted RBP8.33□□□□□ -1.08
RFFL-203ENST00000413582 SF3A3Q12874 501 aaKnown RBP eCLIP8.33□□□□□ -1.081e-6■■■■■ 39.1
RFFL-203ENST00000413582 KLF10Q13118 480 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 LASP1Q14847 261 aaKnown RBP8.33□□□□□ -1.08
RFFL-203ENST00000413582 MLC1Q15049 377 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 TIGD2Q4W5G0 525 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 SYT14P1Q58G82 188 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 C9orf135Q5VTT2 229 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 CDC73Q6P1J9 531 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 RINLQ6ZS11 566 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 MIER2Q8N344 545 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 ZNF540Q8NDQ6 660 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 C1orf162Q8NEQ5 155 aaPredicted RBP8.33□□□□□ -1.08
RFFL-203ENST00000413582 TOR1AIP2Q8NFQ8 470 aa8.33□□□□□ -1.08
RFFL-203ENST00000413582 RP9Q8TA86 221 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms