RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 CXCL13O43927 109 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 OR10H3O60404 316 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 RAMP1O60894 148 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 FCN3O75636 299 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 OR9G9P0C7N8 305 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 RNH1P13489 461 aaKnown RBP3.75□□□□□ -1.81
BRCA1-204ENST00000412061 HOXB8P17481 243 aaPredicted RBP3.75□□□□□ -1.81
BRCA1-204ENST00000412061 OPRD1P41143 372 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 NAA10P41227 235 aaPredicted RBP3.75□□□□□ -1.81
BRCA1-204ENST00000412061 CX3CR1P49238 355 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 MRPL19P49406 292 aaKnown RBP3.75□□□□□ -1.81
BRCA1-204ENST00000412061 CRYBA2P53672 197 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 PLTPP55058 493 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 PAX9P55771 341 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 ATP5J2P56134 94 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 TMEM50BP56557 158 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 ERVK-25P63136 954 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 MTF1Q14872 753 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 CYTH1Q15438 398 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 MLF2Q15773 248 aaPredicted RBP3.75□□□□□ -1.81
BRCA1-204ENST00000412061 FAM120AOSQ5T036 256 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 SEL1L2Q5TEA6 688 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 GPR107Q5VW38 600 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 SH2D5Q6ZV89 423 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 CEACAM19Q7Z692 300 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 HOGA1Q86XE5 327 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 LRRC8AQ8IWT6 810 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 ZNF100Q8IYN0 542 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 GATSQ8NAP1 163 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 FBXL13Q8NEE6 735 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 OR52E5Q8NH55 327 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 CCDC126Q96EE4 140 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 ZBED6CLQ96FA7 236 aaPredicted RBP3.75□□□□□ -1.81
BRCA1-204ENST00000412061 JSRP1Q96MG2 331 aaPredicted RBP3.75□□□□□ -1.81
BRCA1-204ENST00000412061 OPALINQ96PE5 141 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 RCHY1Q96PM5 261 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 CSPG4P5Q96PW8 444 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 SLC35A5Q9BS91 424 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 SYT11Q9BT88 431 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 HOXD1Q9GZZ0 328 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 CSNK1G1Q9HCP0 422 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 MEPEQ9NQ76 525 aaPredicted RBP3.75□□□□□ -1.81
BRCA1-204ENST00000412061 ZNF275Q9NSD4 429 aaPredicted RBP3.75□□□□□ -1.81
BRCA1-204ENST00000412061 ADAM22Q9P0K1 906 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 ZNF580Q9UK33 172 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 DDX19BQ9UMR2 479 aa3.75□□□□□ -1.81
BRCA1-204ENST00000412061 TRBV5-4A0A0C4DH59 114 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.74□□□□□ -1.81
BRCA1-204ENST00000412061 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.74□□□□□ -1.81
BRCA1-204ENST00000412061 PRSS37A4D1T9 235 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 IGLON5A6NGN9 336 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 TRPC5OSA6NMA1 111 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 A8MUA0 341 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 FAM72CH0Y354 149 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 SIRPB1O00241 398 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 ZBTB5O15062 677 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 SCAMP2O15127 329 aaKnown RBP3.74□□□□□ -1.81
BRCA1-204ENST00000412061 PCDH7O60245 1069 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 TOM1O60784 492 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 NDUFS6O75380 124 aaKnown RBP3.74□□□□□ -1.81
BRCA1-204ENST00000412061 UGT2B17O75795 530 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 CBR3O75828 277 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 CDK14O94921 469 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 OXSR1O95747 527 aaPredicted RBP3.74□□□□□ -1.81
BRCA1-204ENST00000412061 NUDT14O95848 222 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 CLPTM1O96005 669 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 PIGRP01833 764 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 UBTFL1P0CB47 393 aaPredicted RBP3.74□□□□□ -1.81
BRCA1-204ENST00000412061 FGF9P31371 208 aaPredicted RBP3.74□□□□□ -1.81
BRCA1-204ENST00000412061 CFHR2P36980 270 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 TMED10P49755 219 aaKnown RBP3.74□□□□□ -1.81
BRCA1-204ENST00000412061 DAP3P51398 398 aaKnown RBP3.74□□□□□ -1.81
BRCA1-204ENST00000412061 LINC01547P58512 204 aaPredicted RBP3.74□□□□□ -1.81
BRCA1-204ENST00000412061 PSMC5P62195 406 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 LRRC63Q05C16 580 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 ZNF33BQ06732 778 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 SCRN3Q0VDG4 424 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 FASTKQ14296 549 aaKnown RBP3.74□□□□□ -1.81
BRCA1-204ENST00000412061 ZIC1Q15915 447 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 FAM72AQ5TYM5 149 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 STUMQ69YW2 141 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 FAM72DQ6L9T8 149 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 ASCL4Q6XD76 172 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 ZNF836Q6ZNA1 936 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 Q6ZSR3 168 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 HDDC2Q7Z4H3 204 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 FAM72BQ86X60 149 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 CCDC71Q8IV32 467 aaPredicted RBP3.74□□□□□ -1.81
BRCA1-204ENST00000412061 NUDCD3Q8IVD9 361 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 SELENOHQ8IZQ5 122 aaKnown RBP3.74□□□□□ -1.81
BRCA1-204ENST00000412061 ARHGAP18Q8N392 663 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 CSNK1A1LQ8N752 337 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 ZNF781Q8N8C0 355 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 SAMD12Q8N8I0 201 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 INO80EQ8NBZ0 244 aaPredicted RBP3.74□□□□□ -1.81
BRCA1-204ENST00000412061 ZNRF1Q8ND25 227 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 ZNF248Q8NDW4 579 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 OR5AP2Q8NGF4 316 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 OR4D6Q8NGJ1 314 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 TRUB1Q8WWH5 349 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms