RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 HSD17B6O14756 317 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 PRKYO43930 277 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 OR7A10O76100 309 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 NXPH4O95158 308 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 LYPD3O95274 346 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 NTN1O95631 604 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 PPP1R3DO95685 299 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 BMP15O95972 392 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 ATP1A1P05023 1023 aaKnown RBP4.07□□□□□ -1.76
LSM5-205ENST00000409952 LGALS2P05162 132 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 S100A6P06703 90 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 DCNP07585 359 aaKnown RBP4.07□□□□□ -1.76
LSM5-205ENST00000409952 HOXB8P17481 243 aaPredicted RBP4.07□□□□□ -1.76
LSM5-205ENST00000409952 UGT1A4P22310 534 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 SLC1A1P43005 524 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 PRKXP51817 358 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 MFAP2P55001 183 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 DSCR9P59020 149 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 PSMC5P62195 406 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 ARL16Q0P5N6 197 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 GNMTQ14749 295 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 VAMP3Q15836 100 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 MUC21Q5SSG8 566 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 C6orf183Q5T699 404 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 C9orf57Q5W0N0 161 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 CCDC137Q6PK04 289 aaKnown RBP4.07□□□□□ -1.76
LSM5-205ENST00000409952 CERS6Q6ZMG9 384 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 C16orf82Q7Z2V1 217 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 SNX20Q7Z614 316 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 RBM45Q8IUH3 476 aaKnown RBP4.07□□□□□ -1.76
LSM5-205ENST00000409952 APRG1Q8IVJ8 170 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 LRRC75AQ8NAA5 344 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 INO80EQ8NBZ0 244 aaPredicted RBP4.07□□□□□ -1.76
LSM5-205ENST00000409952 RFESDQ8TAC1 157 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 ZPLD1Q8TCW7 415 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 SETD7Q8WTS6 366 aaKnown RBP4.07□□□□□ -1.76
LSM5-205ENST00000409952 DDI1Q8WTU0 396 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 PIH1D2Q8WWB5 315 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 TRUB1Q8WWH5 349 aaKnown RBP4.07□□□□□ -1.76
LSM5-205ENST00000409952 HTR3CQ8WXA8 447 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 CACNG8Q8WXS5 425 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 NEUROG1Q92886 237 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 UFD1Q92890 307 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 STMN2Q93045 179 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 CCDC126Q96EE4 140 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 MOCOSQ96EN8 888 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 CSPG4P5Q96PW8 444 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 ZNF300Q96RE9 604 aaPredicted RBP4.07□□□□□ -1.76
LSM5-205ENST00000409952 CYTH2Q99418 400 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 SLC29A1Q99808 456 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 PRRG3Q9BZD7 231 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 RAB1BQ9H0U4 201 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 WDR13Q9H1Z4 485 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 OR51M1Q9H341 326 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 ZNF385DQ9H6B1 395 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 REEP4Q9H6H4 257 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 ERVW-1Q9UQF0 538 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 RNF24Q9Y225 148 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 RBMX2Q9Y388 322 aaKnown RBP4.07□□□□□ -1.76
LSM5-205ENST00000409952 KPTNQ9Y664 436 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 TRAV6A0A075B6T7 132 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 A0A1W2PRD5 423 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 SMIM1B2RUZ4 78 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 E7ESA3 106 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 G3V2L1 256 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 ZNF749O43361 778 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 PCDH7O60245 1069 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 MAGEC1O60732 1142 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 TOM1O60784 492 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 FCN3O75636 299 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 OXSR1O95747 527 aaPredicted RBP4.06□□□□□ -1.76
LSM5-205ENST00000409952 ABOP16442 354 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 MMP12P39900 470 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 LEPP41159 167 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 ELK3P41970 407 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 YAP1P46937 504 aaKnown RBP4.06□□□□□ -1.76
LSM5-205ENST00000409952 NPBWR2P48146 333 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 TMED10P49755 219 aaKnown RBP4.06□□□□□ -1.76
LSM5-205ENST00000409952 CCNHP51946 323 aaPredicted RBP4.06□□□□□ -1.76
LSM5-205ENST00000409952 KPNA2P52292 529 aaKnown RBP4.06□□□□□ -1.76
LSM5-205ENST00000409952 ART1P52961 327 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 RIPK4P57078 832 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 MRPS22P82650 360 aaKnown RBP4.06□□□□□ -1.76
LSM5-205ENST00000409952 DPYSL3Q14195 570 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 CYTH1Q15438 398 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 HLA-BQ31612 363 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 SLC22A6Q4U2R8 563 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 KLHL22Q53GT1 634 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 CARD16Q5EG05 197 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 FAM219BQ5XKK7 198 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 REP15Q6BDI9 236 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 ASCL4Q6XD76 172 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 C9orf139Q6ZV77 190 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 NDUFAF7Q7L592 441 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 CARM1Q86X55 608 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 IQCKQ8N0W5 287 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 MS4A15Q8N5U1 240 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 TTC29Q8NA56 475 aaPredicted RBP4.06□□□□□ -1.76
LSM5-205ENST00000409952 ZNF248Q8NDW4 579 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 OR52B6Q8NGF0 335 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms