RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 BCL2L14Q9BZR8 327 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 SACM1LQ9NTJ5 587 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 MCTS1Q9ULC4 181 aaKnown RBP10.44□□□□□ -0.74
SNX13-202ENST00000409604 SIP14410 1827 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 MAS1P04201 325 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 EDN3P14138 238 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 GGT2P36268 569 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 DEFA1P59665 94 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 DEFA3P59666 94 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 SNRPNP63162 240 aaKnown RBP10.44□□□□□ -0.74
SNX13-202ENST00000409604 SPHARQ15513 63 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 ARHGAP11BQ3KRB8 267 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 SPATS1Q496A3 300 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 ZNF574Q6ZN55 896 aaPredicted RBP10.44□□□□□ -0.74
SNX13-202ENST00000409604 BEST3Q8N1M1 668 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 TM9SF4Q92544 642 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 HIST1H2AAQ96QV6 131 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 ULBP2Q9BZM5 246 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 FLRT3Q9NZU0 649 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 EXO1Q9UQ84 846 aaKnown RBP10.44□□□□□ -0.74
SNX13-202ENST00000409604 RNF6Q9Y252 685 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 WNK2Q9Y3S1 2297 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 ZFYVE26Q68DK2 2539 aa10.44□□□□□ -0.74
SNX13-202ENST00000409604 LOC110117498-PIK3R3F6TDL0 507 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 LCATP04180 440 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 ZNF84P51523 738 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 TMEM201Q5SNT2 666 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 ARSKQ6UWY0 536 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 ALDH16A1Q8IZ83 802 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 ZADH2Q8N4Q0 377 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 ZNF611Q8N823 705 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 POC5Q8NA72 575 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 OR2T4Q8NH00 348 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 FAR1Q8WVX9 515 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 PMM1Q92871 262 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 WDR34Q96EX3 536 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 DCSTAMPQ9H295 470 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 ZNF385DQ9H6B1 395 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 ERVMER34-1Q9H9K5 563 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 MYOTQ9UBF9 498 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 POLHQ9Y253 713 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 PCDHGB5Q9Y5G0 923 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 USF3Q68DE3 2245 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 TMEM72A0PK05 275 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 A6NLC8 198 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 MRPL33O75394 65 aaKnown RBP10.43□□□□□ -0.74
SNX13-202ENST00000409604 HNRNPCP07910 306 aaKnown RBP eCLIP10.43□□□□□ -0.74
SNX13-202ENST00000409604 IL32P24001 234 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 MNDAP41218 407 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 NCS1P62166 190 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 PPIAP62937 165 aaKnown RBP10.43□□□□□ -0.74
SNX13-202ENST00000409604 FOXF1Q12946 379 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 SEC23BQ15437 767 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 PRTGQ2VWP7 1150 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 TMPPEQ6ZT21 453 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 SNX29P2Q8IUI4 249 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 DTNBP1Q96EV8 351 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 ZNF768Q9H5H4 540 aaKnown RBP10.43□□□□□ -0.74
SNX13-202ENST00000409604 YARS2Q9Y2Z4 477 aaKnown RBP10.43□□□□□ -0.74
SNX13-202ENST00000409604 PCDHGB7Q9Y5F8 929 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 A0A096LPE4 126 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 A0A1W2PPZ6 126 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 CLCA1A8K7I4 914 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 GALR2O43603 387 aaPredicted RBP10.43□□□□□ -0.74
SNX13-202ENST00000409604 OR8G3PP0DMU2 310 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 IFNGR1P15260 489 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 SLC15A1P46059 708 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 POU3F4P49335 361 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 PCBP4P57723 403 aaKnown RBP10.43□□□□□ -0.74
SNX13-202ENST00000409604 UBE2NP61088 152 aaKnown RBP10.43□□□□□ -0.74
SNX13-202ENST00000409604 ACSM5Q6NUN0 579 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 ARHGAP11AQ6P4F7 1023 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 TSPYL5Q86VY4 417 aaPredicted RBP10.43□□□□□ -0.74
SNX13-202ENST00000409604 PM20D2Q8IYS1 436 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 OR7G1Q8NGA0 311 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 PGAM5Q96HS1 289 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 IER2Q9BTL4 223 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 LRFN3Q9BTN0 628 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 B3GAT2Q9NPZ5 323 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 TRIM36Q9NQ86 728 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 TESQ9UGI8 421 aaKnown RBP10.43□□□□□ -0.74
SNX13-202ENST00000409604 PCDHGA3Q9Y5H0 932 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 ANKRD61A6NGH8 418 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 TACSTD2P09758 323 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 CLUP10909 449 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 PRKAR1BP31321 381 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 CSNK1A1P48729 337 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 CASP6P55212 293 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 PSG6Q00889 435 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 OR1C1Q15619 314 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 CD226Q15762 336 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 TBC1D25Q3MII6 688 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 C1orf140Q5VVS0 124 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 HBMQ6B0K9 141 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 SLC23A3Q6PIS1 610 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 ZNF627Q7L945 461 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 AAED1Q7RTV5 226 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 CEACAM19Q7Z692 300 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 GPR32P1Q8NGA4 272 aa10.43□□□□□ -0.74
SNX13-202ENST00000409604 TUBA1CQ9BQE3 449 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms