RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 CTU2Q2VPK5 515 aaKnown RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 ADPRMQ3LIE5 342 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 SYT14P1Q58G82 188 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 FAM69AQ5T7M9 428 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 MRM1Q6IN84 353 aaKnown RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 FIP1L1Q6UN15 594 aaKnown RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 SHISA6Q6ZSJ9 500 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 LRRC28Q86X40 367 aaPredicted RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 MEX3DQ86XN8 651 aaKnown RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 NKAIN4Q8IVV8 208 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 FAM160A2Q8N612 972 aaPredicted RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 BCORP1Q8N888 145 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 OR5J2Q8NH18 312 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 TRMT10AQ8TBZ6 339 aaKnown RBP4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 TBC1D15Q8TC07 691 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 DUSP19Q8WTR2 217 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 ALG12Q9BV10 488 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 ULBP3Q9BZM4 244 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 CMC2Q9NRP2 79 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 SLC6A13Q9NSD5 602 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 UCKL1Q9NWZ5 548 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 MED11Q9P086 117 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 KLHL9Q9P2J3 617 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 VDAC3Q9Y277 283 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 ZNF281Q9Y2X9 895 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 SPEF1Q9Y4P9 236 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 MTCH2Q9Y6C9 303 aa4.38□□□□□ -1.71
PCDH11X-207ENST00000406881 CDHR4A6H8M9 788 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 PRAMEF25A6NGN4 478 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 BOLA2-SMG1P6H3BVE0 249 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 GABRPO00591 440 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 FCMRO60667 390 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 EIF1BO60739 113 aaKnown RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 GLCEO94923 617 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 IL33O95760 270 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 ERGP11308 486 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 PTBP1P26599 531 aaKnown RBP eCLIP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 HOXD12P35452 270 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 AQP2P41181 271 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 APOBEC1P41238 236 aaKnown RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 MNX1P50219 401 aaPredicted RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 MAP2K6P52564 334 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 SUMO3P55854 103 aaPredicted RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 CTBP2P56545 445 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 BDH1Q02338 343 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 MALLQ13021 153 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 SF3A2Q15428 464 aaKnown RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 ODF4Q2M2E3 257 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 C4orf46Q504U0 113 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 CARD17Q5XLA6 110 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 FCRLBQ6BAA4 426 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 FCRL6Q6DN72 434 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 SLC25A24Q6NUK1 477 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 CNIH2Q6PI25 160 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 WDR88Q6ZMY6 472 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 VN1R4Q7Z5H5 301 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 TMEM179BQ7Z7N9 219 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 ZNF584Q8IVC4 421 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 NLGN4XQ8N0W4 816 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 OR8K3Q8NH51 312 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 NANOS1Q8WY41 292 aaKnown RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 ST8SIA1Q92185 356 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 AKAP1Q92667 903 aaKnown RBP eCLIP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 SLC41A2Q96JW4 573 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 GAL3ST1Q99999 423 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 NAA50Q9GZZ1 169 aaKnown RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 CST11Q9H112 138 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 ATG5Q9H1Y0 275 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 CHST8Q9H2A9 424 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 GPATCH2Q9NW75 528 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 PISDQ9UG56 409 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 SNX11Q9Y5W9 270 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 NPFFR2Q9Y5X5 522 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 PIGBOS1A0A0B4J2F0 54 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 A0A1W2PQF6 199 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 SLC35F4A4IF30 521 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 TMEM212A6NML5 194 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 HSPB2A8KAH6 182 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 H3BML4 177 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 TOX3O15405 576 aaPredicted RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 SYT7O43581 403 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 FOXD2O60548 495 aaPredicted RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 CSO75390 466 aaKnown RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 WBP4O75554 376 aaKnown RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 SOD1P00441 154 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 RLN2P04090 185 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 DCNP07585 359 aaKnown RBP4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 RAB40ALP0C0E4 278 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 PGAM2P15259 253 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 DRD5P21918 477 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 FCARP24071 287 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 GRPRP30550 384 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 GLP1RP43220 463 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 SIRPAP78324 504 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 SLC14A1Q13336 389 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 HSPB2Q16082 182 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 FXNQ16595 210 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 NTRK2Q16620 822 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 OR2G6Q5TZ20 316 aa4.37□□□□□ -1.71
PCDH11X-207ENST00000406881 CD300LDQ6UXZ3 194 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms