RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 SPANXN4Q5MJ08 99 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 Q6ZNX1 250 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 ARFGAP1Q8N6T3 406 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 HSD17B11Q8NBQ5 300 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 OR4A16Q8NH70 328 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 ZNF675Q8TD23 568 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 VN1R3Q9BXE9 311 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 EXOSC1Q9Y3B2 195 aaKnown RBP10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 MYH7BA7E2Y1 1941 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 PMS2P1A4D2B8 440 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 C2CD4DB7Z1M9 353 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 PPIHO43447 177 aaKnown RBP10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 BMP2P12643 396 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 EXOSC6Q5RKV6 272 aaKnown RBP10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 FAM58AQ8N1B3 248 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 TRMT61AQ96FX7 289 aaKnown RBP10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 INTS6Q9UL03 887 aaKnown RBP10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 PRSS56P0CW18 603 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 FGF3P11487 239 aaPredicted RBP10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 MNX1P50219 401 aaPredicted RBP10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 GPR19Q15760 415 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 ZNF704Q6ZNC4 412 aaPredicted RBP10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 PARS2Q7L3T8 475 aaKnown RBP10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 GPRIN1Q7Z2K8 1008 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 RDH10Q8IZV5 341 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 BEST3Q8N1M1 668 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 OR5M1Q8NGP8 315 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 HYLS1Q96M11 299 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 MS4A4EQ96PG1 132 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 NCBP2LA6PVI3 153 aaKnown RBP10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 ANHXE9PGG2 379 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 M6PRP20645 277 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 MYF6P23409 242 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 SNCAP37840 140 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 GCGRP47871 477 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 POU4F2Q12837 409 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 ZNF468Q5VIY5 522 aaPredicted RBP10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 GLIS1Q8NBF1 620 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 IP6K3Q96PC2 410 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 GPR22Q99680 433 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 ADAM19Q9H013 955 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 MOB1AQ9H8S9 216 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 CBLCQ9ULV8 474 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 A8MVM7 634 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 MAKP20794 623 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 KITLGP21583 273 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 TAS2R60P59551 318 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 LDLRAD1Q5T700 205 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 SKA3Q8IX90 412 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 CHCHD4Q8N4Q1 142 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 TMBIM1Q969X1 311 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 APH1AQ96BI3 265 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 RTP4Q96DX8 246 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 SEC14L4Q9UDX3 406 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 SSUH2Q9Y2M2 353 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 USP54Q70EL1 1684 aa10.24□□□□□ -0.77
CACNA1C-216ENST00000399638 OR2T1O43869 369 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 CCDC71Q8IV32 467 aaPredicted RBP10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 OR9I1Q8NGQ6 314 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 AK6Q9Y3D8 172 aaKnown RBP10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 RAB19A4D1S5 217 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 GALR3O60755 368 aaPredicted RBP10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 ALOX12BO75342 701 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 SLC35E2BP0CK96 405 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 ACTC1P68032 377 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 ACTA1P68133 377 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 SYT13Q7L8C5 426 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 CDX2Q99626 313 aaPredicted RBP10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 SLC30A3Q99726 388 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 CPPED1Q9BRF8 314 aaPredicted RBP10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 PBDC1Q9BVG4 233 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 B3GAT1Q9P2W7 334 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 MAB21L2Q9Y586 359 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 DVL2O14641 736 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 SLC19A2O60779 497 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 FPR1P21462 350 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 MPLP40238 635 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 DNAJB13P59910 316 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 ACTA2P62736 377 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 ACTG2P63267 376 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 GALNT2Q10471 571 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 HNRNPA0Q13151 305 aaKnown RBP10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 ZNF181Q2M3W8 571 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 LYRM7Q5U5X0 104 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 CMTM4Q8IZR5 234 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 ARL6IP6Q8N6S5 226 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 PAQR8Q8TEZ7 354 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 KATNB1Q9BVA0 655 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 OR2B2Q9GZK3 357 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 TP63Q9H3D4 680 aaPredicted RBP10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 A0A1W2PPV4 95 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 XRCC3O43542 346 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 FADS1O60427 444 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 HLA-DPB1P04440 258 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 RAC1P63000 192 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 POU3F1Q03052 451 aaPredicted RBP10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 PLAURQ03405 335 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 PCLAFQ15004 111 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 OR8G1Q15617 311 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 HES5Q5TA89 166 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms