RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 TMEM255BQ8WV15 326 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 CANT1Q8WVQ1 401 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 DDIT4LQ96D03 193 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 VKORC1Q9BQB6 163 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 FUZQ9BT04 418 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TMEM43Q9BTV4 400 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 MAGIXQ9H6Y5 334 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ERRFI1Q9UJM3 462 aaPredicted RBP11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ING1Q9UK53 422 aaPredicted RBP11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 HDGFL3Q9Y3E1 203 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 SPIN1Q9Y657 262 aaPredicted RBP11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 MYO18BQ8IUG5 2567 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 HELZ2Q9BYK8 2649 aaKnown RBP11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 USP9XQ93008 2570 aaPredicted RBP11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 IGHV3-15A0A0B4J1V0 119 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 DHRS12A0PJE2 317 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 CLEC18AA5D8T8 446 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 LRRN3E7EW58 273 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 CCL21O00585 134 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 LRRTM2O43300 516 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 PIP5K1CO60331 668 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 PMS2P2O95744 297 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 BGLAPP02818 100 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 FABP3P05413 133 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 HOXD4P09016 255 aaPredicted RBP11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 THRBP10828 461 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 RHCEP18577 417 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ENPP1P22413 925 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 FKBP2P26885 142 aaKnown RBP11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 CEACAM8P31997 349 aaPredicted RBP11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 P2RY4P51582 365 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 CARD18P57730 90 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 RAC3P60763 192 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 CLEC18BQ6UXF7 455 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 SPATA24Q86W54 205 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 CLEC18CQ8NCF0 446 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 PFN4Q8NHR9 129 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 RNF217Q8TC41 542 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 RNF128Q8TEB7 428 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ROBO4Q8WZ75 1007 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TAAR8Q969N4 342 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 CCDC120Q96HB5 630 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 MPP4Q96JB8 637 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 LRGUKQ96M69 825 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 MOGAT1Q96PD6 335 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TRIM15Q9C019 465 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 CALHM2Q9HA72 323 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 NMNAT1Q9HAN9 279 aaPredicted RBP11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 VNN3Q9NY84 501 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 STOML1Q9UBI4 398 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 SEC14L4Q9UDX3 406 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ZNF175Q9Y473 711 aa11.1□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TRAV36DV7A0A075B6V5 113 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 A0A087WUU8 490 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 A0A1W2PRQ8 180 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 SLC22A20A6NK97 555 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 SULT2B1O00204 365 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 NQO1P15559 274 aaKnown RBP11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 FPR1P21462 350 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 IDUAP35475 653 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 RPS5P46782 204 aaKnown RBP11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 LIMS1P48059 325 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 AGFG1P52594 562 aaKnown RBP11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 CASP6P55212 293 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 RPS3AP61247 264 aaKnown RBP11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 H3F3AP84243 136 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ST3GAL3Q11203 375 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 FOXD4Q12950 439 aaPredicted RBP11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 DGCR6Q14129 220 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TRAM2Q15035 370 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 SEC23BQ15437 767 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 GUSBP1Q15486 140 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 CDSNQ15517 529 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 C1orf146Q5VVC0 180 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ABLIM2Q6H8Q1 611 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 SLC46A3Q7Z3Q1 461 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 PAPD5Q8NDF8 572 aaKnown RBP11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 SLC7A13Q8TCU3 470 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 WNT2BQ93097 391 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 CPNE4Q96A23 557 aaPredicted RBP11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 PIP5K1AQ99755 562 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 RNF122Q9H9V4 155 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 C20orf141Q9NUB4 165 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TRAPPC4Q9Y296 219 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TESMINQ9Y4I5 508 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 PCNX1Q96RV3 2341 aa11.09□□□□□ -0.63
HLA-DQB1-203ENST00000399082 DIDO1Q9BTC0 2240 aaKnown RBP11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 A0A0G2JNJ9 132 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 TRBV4-1A0A0J9YWV2 114 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 A0A1B0GUH1 482 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ENO4A6NNW6 628 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 ANKRD65E5RJM6 399 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 KPNA4O00629 521 aaPredicted RBP11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 DNPH1O43598 174 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 FKBP6O75344 327 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 AHSA1O95433 338 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 LDLRP01130 860 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 GPIP06744 558 aa11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 H1F0P07305 194 aaKnown RBP11.08□□□□□ -0.64
HLA-DQB1-203ENST00000399082 RAP2AP10114 183 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms