RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 BTLAQ7Z6A9 289 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 FAM156AQ8NDB6 213 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 RBM15BQ8NDT2 890 aaKnown RBP18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 STK35Q8TDR2 534 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 FAM162AQ96A26 154 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 CDRT15Q96T59 188 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 ADPRHL2Q9NX46 363 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 JKAMPQ9P055 326 aa18.91■□□□□ 0.62
TSPAN4-206ENST00000397408 PKDREJQ9NTG1 2253 aa18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 CYTIPO60759 359 aa18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 PRKD3O94806 890 aa18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 AHSA1O95433 338 aa18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 ZNF682O95780 498 aa18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 T-ENOLP0DO92 83 aa18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 TCN1P20061 433 aaPredicted RBP18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 AGTR1P30556 359 aa18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 CPOXP36551 454 aa18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 CDH12P55289 794 aa18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 SELENOWP63302 87 aa18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 SLC35A1P78382 337 aa18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 CEACAM7Q14002 265 aa18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 OR7A5Q15622 319 aa18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 FBXL19-AS1Q494R0 122 aa18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 SWT1Q5T5J6 900 aaKnown RBP18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 ABLIM2Q6H8Q1 611 aa18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 LZICQ8WZA0 190 aa18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 SLC38A4Q969I6 547 aa18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 LRRC46Q96FV0 321 aa18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 KLHL9Q9P2J3 617 aa18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 KLHL13Q9P2N7 655 aa18.9■□□□□ 0.62
TSPAN4-206ENST00000397408 SETXQ7Z333 2677 aaKnown RBP18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 LIPT2A6NK58 231 aa18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 SERPINA1P01009 418 aa18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 GPIP06744 558 aa18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 HSD17B1P14061 328 aa18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 FPR1P21462 350 aa18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 UQCRC1P31930 480 aa18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 OR1E2P47887 323 aa18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 EGR4Q05215 589 aa18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 RASGEF1BQ0VAM2 473 aa18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 DEF8Q6ZN54 512 aa18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 VTCN1Q7Z7D3 282 aa18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 TSPYL5Q86VY4 417 aaPredicted RBP18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 TUSC5Q8IXB3 177 aa18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 OR6K3Q8NGY3 331 aa18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 ADAMTS16Q8TE57 1224 aa18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 RNASE6Q93091 150 aaKnown RBP18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 PSD2Q9BQI7 771 aa18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 TAPBPLQ9BX59 468 aa18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 PCDHAC1Q9H158 963 aa18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 OPN3Q9H1Y3 402 aaPredicted RBP18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 PROCRQ9UNN8 238 aa18.89■□□□□ 0.61
TSPAN4-206ENST00000397408 IGKV1D-42A0A075B6H8 117 aa18.88■□□□□ 0.61
TSPAN4-206ENST00000397408 A0A087WUJ7 227 aa18.88■□□□□ 0.61
TSPAN4-206ENST00000397408 TRAPPC13A5PLN9 417 aa18.88■□□□□ 0.61
TSPAN4-206ENST00000397408 ZNF814B7Z6K7 855 aa18.88■□□□□ 0.61
TSPAN4-206ENST00000397408 MSTNO14793 375 aa18.88■□□□□ 0.61
TSPAN4-206ENST00000397408 EIF1BO60739 113 aaKnown RBP18.88■□□□□ 0.61
TSPAN4-206ENST00000397408 PTNP21246 168 aa18.88■□□□□ 0.61
TSPAN4-206ENST00000397408 TMEM201Q5SNT2 666 aa18.88■□□□□ 0.61
TSPAN4-206ENST00000397408 ZNF787Q6DD87 383 aa18.88■□□□□ 0.61
TSPAN4-206ENST00000397408 GLYATQ6IB77 296 aa18.88■□□□□ 0.61
TSPAN4-206ENST00000397408 CBLL1Q75N03 491 aa18.88■□□□□ 0.61
TSPAN4-206ENST00000397408 P3H2Q8IVL5 708 aa18.88■□□□□ 0.61
TSPAN4-206ENST00000397408 PIGXQ8TBF5 258 aa18.88■□□□□ 0.61
TSPAN4-206ENST00000397408 KTI12Q96EK9 354 aaPredicted RBP18.88■□□□□ 0.61
TSPAN4-206ENST00000397408 RBM24Q9BX46 236 aaKnown RBP18.88■□□□□ 0.61
TSPAN4-206ENST00000397408 GP6Q9HCN6 339 aa18.88■□□□□ 0.61
TSPAN4-206ENST00000397408 CD300AQ9UGN4 299 aa18.88■□□□□ 0.61
TSPAN4-206ENST00000397408 ING1Q9UK53 422 aaPredicted RBP18.88■□□□□ 0.61
TSPAN4-206ENST00000397408 CHP2O43745 196 aa18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 RAMP1O60894 148 aa18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 GMNNO75496 209 aa18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 UBOX5O94941 541 aa18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 CGAP01215 116 aa18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 CD8BP10966 210 aa18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 COX6B1P14854 86 aa18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 IGFBP2P18065 325 aa18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 RPS5P46782 204 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 PAQR6Q6TCH4 344 aa18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 C5orf46Q6UWT4 87 aa18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 MEX3BQ6ZN04 569 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 RINLQ6ZS11 566 aa18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 CCDC103Q8IW40 242 aa18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 HSH2DQ96JZ2 352 aa18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 ZNF300Q96RE9 604 aaPredicted RBP18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 TACO1Q9BSH4 297 aaKnown RBP18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 NAA11Q9BSU3 229 aaPredicted RBP18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 PTDSS2Q9BVG9 487 aa18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 C12orf49Q9H741 205 aa18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 BCO1Q9HAY6 547 aa18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 GALNT8Q9NY28 637 aa18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 SLC7A7Q9UM01 511 aa18.87■□□□□ 0.61
TSPAN4-206ENST00000397408 ANKHD1Q8IWZ3 2542 aaKnown RBP18.86■□□□□ 0.61
TSPAN4-206ENST00000397408 A8MXE2 369 aa18.86■□□□□ 0.61
TSPAN4-206ENST00000397408 AKR7A3O95154 331 aa18.86■□□□□ 0.61
TSPAN4-206ENST00000397408 THY1P04216 161 aa18.86■□□□□ 0.61
TSPAN4-206ENST00000397408 YES1P07947 543 aa18.86■□□□□ 0.61
TSPAN4-206ENST00000397408 MSX2P35548 267 aaPredicted RBP18.86■□□□□ 0.61
TSPAN4-206ENST00000397408 TAS2R41P59536 307 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms