RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 SHBGP04278 402 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 VSIG8P0DPA2 414 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 NTSP30990 170 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 SERPINB4P48594 390 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 RNF144AP50876 292 aaPredicted RBP11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 C2orf80Q0P641 193 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 DCAF12L2Q5VW00 463 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 KLC3Q6P597 504 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 RBMS3Q6XE24 437 aaKnown RBP11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 BCL6BQ8N143 479 aaPredicted RBP11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 ZIC4Q8N9L1 334 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 OR1K1Q8NGR3 316 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 BCL2L2Q92843 193 aaPredicted RBP11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 TMEM45BQ96B21 275 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 ARL8AQ96BM9 186 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 C16orf58Q96GQ5 468 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 ARL5BQ96KC2 179 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 CCT8L2Q96SF2 557 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 C1QTNF3Q9BXJ4 246 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 EBPLQ9BY08 206 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 C7orf69Q9H7B7 122 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 PARPBPQ9NWS1 579 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 ZNF69Q9UC07 566 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 SLC9A8Q9Y2E8 581 aa11.71□□□□□ -0.53
VCPKMT-201ENST00000395859 DNAH1Q9P2D7 4330 aa11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 IGHV2OR16-5A0A0B4J2B6 119 aa11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 A0A1B0GUS0 222 aa11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 TLDC2A0PJX2 215 aa11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 PIN1P1O15428 100 aa11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 OR4F21O95013 312 aa11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 GSNP06396 782 aa11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 INHBAP08476 426 aa11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 CELA3BP08861 270 aa11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 ANXA4P09525 319 aaPredicted RBP11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 MAGOHP61326 146 aaKnown RBP11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 CBX1P83916 185 aa11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 ACSM2AQ08AH3 577 aa11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 ZNF763Q0D2J5 394 aa11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 BAMBIQ13145 260 aa11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 KLF17Q5JT82 389 aaPredicted RBP11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 MROH9Q5TGP6 573 aa11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 ACSM2BQ68CK6 577 aa11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 MAGEE2Q8TD90 523 aaPredicted RBP11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 SLC25A43Q8WUT9 341 aaPredicted RBP11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 ST8SIA1Q92185 356 aa11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 SLC25A28Q96A46 364 aa11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 ZNF317Q96PQ6 595 aaPredicted RBP11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 BTBD2Q9BX70 525 aa11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 MRPL37Q9BZE1 423 aaKnown RBP11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 CENPHQ9H3R5 247 aa11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 REV1Q9UBZ9 1251 aa11.7□□□□□ -0.54
VCPKMT-201ENST00000395859 NR5A2O00482 541 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 POLR3GO15318 223 aaPredicted RBP11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 PPIHO43447 177 aaKnown RBP11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 EIF4E2O60573 245 aaKnown RBP11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 IGHV2-5P01817 119 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 TSPAN8P19075 237 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 OMGP23515 440 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 GPC1P35052 558 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 HTR6P50406 440 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 SERPINB8P50452 374 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 CDH13P55290 713 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 SESN3P58005 492 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 CBFBQ13951 182 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 SLC17A1Q14916 467 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 ZCCHC12Q6PEW1 402 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 LCA5Q86VQ0 697 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 COX18Q8N8Q8 333 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 ACMSDQ8TDX5 336 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 EPS8L3Q8TE67 593 aaKnown RBP11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 MS4A4EQ96PG1 132 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 PAFAH2Q99487 392 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 GPA33Q99795 319 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 CCDC106Q9BWC9 280 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 KRTAP17-1Q9BYP8 105 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 MS4A5Q9H3V2 200 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 CCDC134Q9H6E4 229 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 PLEK2Q9NYT0 353 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 TMCO1Q9UM00 188 aa11.69□□□□□ -0.54
VCPKMT-201ENST00000395859 A0A096LPK6 155 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 VSTM5A8MXK1 200 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 M0R233 179 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 TIMM23O14925 209 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 SCAMP2O15127 329 aaKnown RBP11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 KNG1P01042 644 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 MDH1P40925 334 aaKnown RBP11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 FRKP42685 505 aaPredicted RBP11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 MAGEA8P43361 318 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 TUBA1BP68363 451 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 TUBA4AP68366 448 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 POU6F2P78424 691 aaPredicted RBP11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 SKP2Q13309 424 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 TIFABQ6ZNK6 161 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 TUBA1AQ71U36 451 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 LINGO2Q7L985 606 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 ADGRG3Q86Y34 549 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 KIR3DL3Q8N743 410 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 POMGNT2Q8NAT1 580 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 DEFB108BQ8NET1 73 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 OTUB1Q96FW1 271 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms