RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 ANHXE9PGG2 379 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 FLRT2O43155 660 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 VEGFDO43915 354 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 C6P13671 934 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 HCCSP53701 268 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 STARD6P59095 220 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 CSRP2Q16527 193 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 EIF2S3LQ2VIR3 472 aaKnown RBP17.4■□□□□ 0.38
HOXC6-202ENST00000394331 PGGHGQ32M88 737 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 OVCH1Q7RTY7 1134 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 ZNF547Q8IVP9 402 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 CMTM4Q8IZR5 234 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 ZNF740Q8NDX6 193 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 PHOSPHO1Q8TCT1 267 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 C15orf40Q8WUR7 153 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 OR8D1Q8WZ84 308 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 ZDHHC5Q9C0B5 715 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 ASF1AQ9Y294 204 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 AKR7A3O95154 331 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 VSIG10L2P0DP72 767 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 ABOP16442 354 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 ZNF3P17036 446 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 SMCO1Q147U7 214 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 ACSM3Q53FZ2 586 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 ZDHHC12Q96GR4 267 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 NDC1Q9BTX1 674 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 ACSS1Q9NUB1 689 aaPredicted RBP17.4■□□□□ 0.38
HOXC6-202ENST00000394331 PLEKHA6Q9Y2H5 1048 aa17.4■□□□□ 0.38
HOXC6-202ENST00000394331 PRRC2BQ5JSZ5 2229 aaKnown RBP17.4■□□□□ 0.38
HOXC6-202ENST00000394331 MAN2B1O00754 1011 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 BCL2L11O43521 198 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 OR2F2O95006 317 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 ADH1CP00326 375 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 HNRNPA1P09651 372 aaKnown RBP eCLIP17.39■□□□□ 0.37
HOXC6-202ENST00000394331 OR2F1Q13607 317 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 H3F3CQ6NXT2 135 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 JMJD6Q6NYC1 403 aaPredicted RBP17.39■□□□□ 0.37
HOXC6-202ENST00000394331 ZFP82Q8N141 532 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 GJD3Q8N144 294 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 OR5D16Q8NGK9 328 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 PHOSPHO2Q8TCD6 241 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 ARRDC3Q96B67 414 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 TAAR2Q9P1P5 351 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 INSL6Q9Y581 213 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 A0A087WUU8 490 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 M0R3H8 397 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 VEGFBP49765 207 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 PGDP52209 483 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 METAP1P53582 386 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 LSM11P83369 360 aaKnown RBP eCLIP17.39■□□□□ 0.37
HOXC6-202ENST00000394331 PRSS53Q2L4Q9 553 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 MTFR2Q6P444 385 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 FAM129CQ86XR2 697 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 BBS1Q8NFJ9 593 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 SLC25A28Q96A46 364 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 TRIM43Q96BQ3 446 aaPredicted RBP17.39■□□□□ 0.37
HOXC6-202ENST00000394331 ZNF707Q96C28 371 aaPredicted RBP17.39■□□□□ 0.37
HOXC6-202ENST00000394331 CAMK1GQ96NX5 476 aa17.39■□□□□ 0.37
HOXC6-202ENST00000394331 KANTRA0A1W2PQU2 76 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 OR14I1A6ND48 311 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 COLCA2A8K830 154 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 GOSR2O14653 212 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 ARL6IP5O75915 188 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 TBXA2RP21731 343 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 ACTR1AP61163 376 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 RBMS2Q15434 407 aaKnown RBP17.38■□□□□ 0.37
HOXC6-202ENST00000394331 C2orf68Q2NKX9 166 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 DMKNQ6E0U4 476 aaPredicted RBP17.38■□□□□ 0.37
HOXC6-202ENST00000394331 TNFAIP8L2Q6P589 184 aaPredicted RBP17.38■□□□□ 0.37
HOXC6-202ENST00000394331 ZNF813Q6ZN06 617 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 GRASPQ7Z6J2 395 aaPredicted RBP17.38■□□□□ 0.37
HOXC6-202ENST00000394331 OR51G2Q8NGK0 314 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 LGALS14Q8TCE9 139 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 EDDM13A0A1B0GTR0 161 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 OR6C74A6NCV1 312 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 HMGN4O00479 90 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 ACHEP22303 614 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 FPR3P25089 353 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 BDKRB2P30411 391 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 FNTBP49356 437 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 BLOC1S1P78537 153 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 HNRNPA1L2Q32P51 320 aaKnown RBP17.38■□□□□ 0.37
HOXC6-202ENST00000394331 C18orf63Q68DL7 685 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 ZNF425Q6IV72 752 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 ING5Q8WYH8 240 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 OR5P2Q8WZ92 322 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 GTF3AQ92664 365 aaKnown RBP17.38■□□□□ 0.37
HOXC6-202ENST00000394331 OR52A5Q9H2C5 316 aa17.38■□□□□ 0.37
HOXC6-202ENST00000394331 PRMT8Q9NR22 394 aaPredicted RBP17.38■□□□□ 0.37
HOXC6-202ENST00000394331 FGF16O43320 207 aa17.37■□□□□ 0.37
HOXC6-202ENST00000394331 ALPPL2P10696 532 aa17.37■□□□□ 0.37
HOXC6-202ENST00000394331 ADRB3P13945 408 aa17.37■□□□□ 0.37
HOXC6-202ENST00000394331 SORDQ00796 357 aa17.37■□□□□ 0.37
HOXC6-202ENST00000394331 CNTN1Q12860 1018 aa17.37■□□□□ 0.37
HOXC6-202ENST00000394331 FNDC3BQ53EP0 1204 aaKnown RBP17.37■□□□□ 0.37
HOXC6-202ENST00000394331 FAM76BQ5HYJ3 339 aa17.37■□□□□ 0.37
HOXC6-202ENST00000394331 DCAF12L2Q5VW00 463 aa17.37■□□□□ 0.37
HOXC6-202ENST00000394331 FAM199XQ6PEV8 388 aaPredicted RBP17.37■□□□□ 0.37
HOXC6-202ENST00000394331 DNM1P46Q6ZS02 220 aa17.37■□□□□ 0.37
HOXC6-202ENST00000394331 COMTD1Q86VU5 262 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms