RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 POLE4Q9NR33 117 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 KLHL1Q9NR64 748 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 MED11Q9P086 117 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 OSGIN1Q9UJX0 560 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 ZNF346Q9UL40 294 aaKnown RBP13.63□□□□□ -0.23
MKS1-202ENST00000393119 RPL36Q9Y3U8 105 aaKnown RBP13.63□□□□□ -0.23
MKS1-202ENST00000393119 AHCTF1Q8WYP5 2266 aa13.62□□□□□ -0.23
MKS1-202ENST00000393119 KNTC1P50748 2209 aa13.62□□□□□ -0.23
MKS1-202ENST00000393119 OR6C76A6NM76 312 aa13.62□□□□□ -0.23
MKS1-202ENST00000393119 UPK1BO75841 260 aa13.62□□□□□ -0.23
MKS1-202ENST00000393119 RPS5P46782 204 aaKnown RBP13.62□□□□□ -0.23
MKS1-202ENST00000393119 PNLIPRP2P54317 469 aa13.62□□□□□ -0.23
MKS1-202ENST00000393119 CDH11P55287 796 aa13.62□□□□□ -0.23
MKS1-202ENST00000393119 TEKQ02763 1124 aa13.62□□□□□ -0.23
MKS1-202ENST00000393119 NCF4Q15080 339 aa13.62□□□□□ -0.23
MKS1-202ENST00000393119 TSTQ16762 297 aaKnown RBP13.62□□□□□ -0.23
MKS1-202ENST00000393119 KLHL12Q53G59 568 aa13.62□□□□□ -0.23
MKS1-202ENST00000393119 WBP2NLQ6ICG8 309 aa13.62□□□□□ -0.23
MKS1-202ENST00000393119 AKAP14Q86UN6 197 aa13.62□□□□□ -0.23
MKS1-202ENST00000393119 OR9Q1Q8NGQ5 310 aa13.62□□□□□ -0.23
MKS1-202ENST00000393119 OR4K13Q8NH42 304 aa13.62□□□□□ -0.23
MKS1-202ENST00000393119 LILRB4Q8NHJ6 448 aa13.62□□□□□ -0.23
MKS1-202ENST00000393119 SGTBQ96EQ0 304 aa13.62□□□□□ -0.23
MKS1-202ENST00000393119 LOXL4Q96JB6 756 aa13.62□□□□□ -0.23
MKS1-202ENST00000393119 Q96MT0 163 aa13.62□□□□□ -0.23
MKS1-202ENST00000393119 MRTO4Q9UKD2 239 aaKnown RBP13.62□□□□□ -0.23
MKS1-202ENST00000393119 OTOGLQ3ZCN5 2332 aa13.62□□□□□ -0.23
MKS1-202ENST00000393119 KDM4EB2RXH2 506 aaPredicted RBP13.61□□□□□ -0.23
MKS1-202ENST00000393119 OPN1LWP04000 364 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 MRPL3P09001 348 aaKnown RBP13.61□□□□□ -0.23
MKS1-202ENST00000393119 AQP2P41181 271 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 MTNR1AP48039 350 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 SERPINB10P48595 397 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 SLC16A1P53985 500 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 CRMP1Q14194 572 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 ISXQ2M1V0 245 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 ARSKQ6UWY0 536 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 CXXC5Q7LFL8 322 aaKnown RBP13.61□□□□□ -0.23
MKS1-202ENST00000393119 P2RY8Q86VZ1 359 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 SIRT6Q8N6T7 355 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 ZFP41Q8N8Y5 198 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 SDR9C7Q8NEX9 313 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 TAAR8Q969N4 342 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 CDCA4Q9BXL8 241 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 OR11A1Q9GZK7 315 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 LAT2Q9GZY6 243 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 RERGLQ9H628 205 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 KRCC1Q9NPI7 259 aaPredicted RBP13.61□□□□□ -0.23
MKS1-202ENST00000393119 CNOT2Q9NZN8 540 aaKnown RBP13.61□□□□□ -0.23
MKS1-202ENST00000393119 MYOTQ9UBF9 498 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 IER3IP1Q9Y5U9 82 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 MED12Q93074 2177 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 LOC100506127A0A0U1RQW1 187 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 C9orf172C9J069 976 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 PRODHO43272 600 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 PPM1BO75688 479 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 F13BP05160 661 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 ZNF806P0C7X5 589 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 HIST1H1CP16403 213 aaKnown RBP13.61□□□□□ -0.23
MKS1-202ENST00000393119 HCCSP53701 268 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 ERVK-25P63136 954 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 SSX1Q16384 188 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 COL28A1Q2UY09 1125 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 LYPD4Q6UWN0 246 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 ZNF517Q6ZMY9 492 aaPredicted RBP13.61□□□□□ -0.23
MKS1-202ENST00000393119 OR52L1Q8NGH7 329 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 OR51G2Q8NGK0 314 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 OR5M1Q8NGP8 315 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 DNAJA4Q8WW22 397 aaPredicted RBP13.61□□□□□ -0.23
MKS1-202ENST00000393119 GATAD2BQ8WXI9 593 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 ERMAPQ96PL5 475 aaPredicted RBP13.61□□□□□ -0.23
MKS1-202ENST00000393119 MGLLQ99685 303 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 TTTY10Q9BZA0 68 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 TP63Q9H3D4 680 aaPredicted RBP13.61□□□□□ -0.23
MKS1-202ENST00000393119 VDAC3Q9Y277 283 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 LSM2Q9Y333 95 aaKnown RBP13.61□□□□□ -0.23
MKS1-202ENST00000393119 PCDHGB2Q9Y5G2 931 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 MPDZO75970 2070 aa13.61□□□□□ -0.23
MKS1-202ENST00000393119 IGHV1-45A0A0A0MS14 117 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 COX6A1P12074 109 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 F8A1P23610 371 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 CCKBRP32239 447 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 SLC1A3P43003 542 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 NRG3P56975 720 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 DCAF12Q5T6F0 453 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 OTPQ5XKR4 325 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 LYPD8Q6UX82 237 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 LNX2Q8N448 690 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 CLDN22Q8N7P3 220 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 OR52E2Q8NGJ4 325 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 RASD2Q96D21 266 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 OPALINQ96PE5 141 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 CCDC86Q9H6F5 360 aaKnown RBP13.6□□□□□ -0.23
MKS1-202ENST00000393119 ZNF160Q9HCG1 818 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 PCDHGA3Q9Y5H0 932 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 ZNF318Q5VUA4 2279 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 ZFHX2Q9C0A1 2572 aaPredicted RBP13.6□□□□□ -0.23
MKS1-202ENST00000393119 OR6C70A6NIJ9 312 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 FAM171A2A8MVW0 826 aa13.6□□□□□ -0.23
MKS1-202ENST00000393119 G3V3Y1 287 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms