RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 ZNF821O75541 412 aaPredicted RBP13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 F12P00748 615 aaPredicted RBP13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 PTHLHP12272 177 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 GPR4P46093 362 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 P2RX1P51575 399 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 OR12D2P58182 307 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 H3F3CQ6NXT2 135 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 JMJD6Q6NYC1 403 aaPredicted RBP13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 Q6ZNB5 142 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 KISS1RQ969F8 398 aaPredicted RBP13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 ZNF75AQ96N20 296 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 ZNF285Q96NJ3 590 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 INPP5EQ9NRR6 644 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 TTLL8A6PVC2 850 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 KLF4O43474 513 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 MTX2O75431 263 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 PRF1P14222 555 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 NT5EP21589 574 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 LUMP51884 338 aaPredicted RBP13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 RAB5BP61020 215 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 BLOC1S1P78537 153 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 OVCH1Q7RTY7 1134 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 KCNRGQ8N5I3 272 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 PHOSPHO2Q8TCD6 241 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 SAMD8Q96LT4 415 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 CAMK1GQ96NX5 476 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 TRMT61BQ9BVS5 477 aaKnown RBP13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 HCAR1Q9BXC0 346 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 UBQLN3Q9H347 655 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 TMEM185BQ9H7F4 350 aa13.53□□□□□ -0.24
VPS9D1-201ENST00000389386 PLXND1Q9Y4D7 1925 aa13.52□□□□□ -0.24
VPS9D1-201ENST00000389386 TRAPPC13A5PLN9 417 aa13.52□□□□□ -0.24
VPS9D1-201ENST00000389386 WRBO00258 174 aa13.52□□□□□ -0.24
VPS9D1-201ENST00000389386 NPC1O15118 1278 aa13.52□□□□□ -0.24
VPS9D1-201ENST00000389386 RB1P06400 928 aa13.52□□□□□ -0.24
VPS9D1-201ENST00000389386 FOLR2P14207 255 aa13.52□□□□□ -0.24
VPS9D1-201ENST00000389386 CCR2P41597 374 aa13.52□□□□□ -0.24
VPS9D1-201ENST00000389386 CBFBQ13951 182 aa13.52□□□□□ -0.24
VPS9D1-201ENST00000389386 C11orf96Q7Z7L8 435 aa13.52□□□□□ -0.24
VPS9D1-201ENST00000389386 DCAF4L2Q8NA75 395 aa13.52□□□□□ -0.24
VPS9D1-201ENST00000389386 OR5J2Q8NH18 312 aa13.52□□□□□ -0.24
VPS9D1-201ENST00000389386 LRIG1Q96JA1 1093 aa13.52□□□□□ -0.24
VPS9D1-201ENST00000389386 KIF26AQ9ULI4 1882 aaPredicted RBP13.52□□□□□ -0.24
VPS9D1-201ENST00000389386 PRUNE2Q8WUY3 3088 aa13.52□□□□□ -0.25
VPS9D1-201ENST00000389386 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.52□□□□□ -0.25
VPS9D1-201ENST00000389386 CDHR4A6H8M9 788 aa13.52□□□□□ -0.25
VPS9D1-201ENST00000389386 TMEM202A6NGA9 273 aa13.52□□□□□ -0.25
VPS9D1-201ENST00000389386 ICOSLGO75144 302 aa13.52□□□□□ -0.25
VPS9D1-201ENST00000389386 ARL6IP5O75915 188 aa13.52□□□□□ -0.25
VPS9D1-201ENST00000389386 ADH7P40394 386 aa13.52□□□□□ -0.25
VPS9D1-201ENST00000389386 RPE65Q16518 533 aa13.52□□□□□ -0.25
VPS9D1-201ENST00000389386 CHST14Q8NCH0 376 aa13.52□□□□□ -0.25
VPS9D1-201ENST00000389386 DIO2Q92813 273 aa13.52□□□□□ -0.25
VPS9D1-201ENST00000389386 PHYHIPLQ96FC7 376 aa13.52□□□□□ -0.25
VPS9D1-201ENST00000389386 SLC46A2Q9BY10 475 aa13.52□□□□□ -0.25
VPS9D1-201ENST00000389386 NEUROD4Q9HD90 331 aa13.52□□□□□ -0.25
VPS9D1-201ENST00000389386 ACSS1Q9NUB1 689 aaPredicted RBP13.52□□□□□ -0.25
VPS9D1-201ENST00000389386 ANKRD10Q9NXR5 420 aa13.52□□□□□ -0.25
VPS9D1-201ENST00000389386 ST6GALNAC2Q9UJ37 374 aa13.52□□□□□ -0.25
VPS9D1-201ENST00000389386 OBSL1O75147 1896 aa13.52□□□□□ -0.25
VPS9D1-201ENST00000389386 ANKRD61A6NGH8 418 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 CPSF4LA6NMK7 179 aaKnown RBP13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 COLCA2A8K830 154 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 LRG1P02750 347 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 C8AP07357 584 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 FBP1P09467 338 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 NPPBP16860 134 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 NDUFV2P19404 249 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 DPP4P27487 766 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 PPP2R1BP30154 601 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 PYCR1P32322 319 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 MEF2AQ02078 507 aaPredicted RBP13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 ZNF85Q03923 595 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 C3orf33Q6P1S2 294 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 BBS10Q8TAM1 723 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 TNFAIP8L1Q8WVP5 186 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 ASB13Q8WXK3 278 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 WDR34Q96EX3 536 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 LYSMD1Q96S90 227 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 TRPC4Q9UBN4 977 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 CD84Q9UIB8 345 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 LSM7Q9UK45 103 aaKnown RBP13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 FOXJ3Q9UPW0 622 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 KANTRA0A1W2PQU2 76 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 FRS3O43559 492 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 RLN1P04808 185 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 CHRM4P08173 479 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 C1GALT1C1LP0DN25 315 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 CSF2RBP32927 897 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 GCGRP47871 477 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 PCBP4P57723 403 aaKnown RBP13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 ZNF697Q5TEC3 545 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 C11orf88Q6PI97 169 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 FCRLAQ7L513 359 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 MISPQ8IVT2 679 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 NKAIN4Q8IVV8 208 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 KLK6Q92876 244 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 EFCAB11Q9BUY7 163 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 RNF122Q9H9V4 155 aa13.51□□□□□ -0.25
VPS9D1-201ENST00000389386 BCL2L10Q9HD36 194 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms