RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 HAX1O00165 279 aa20.21■□□□□ 0.83
U2AF1-202ENST00000380276 KLF11O14901 512 aa20.21■□□□□ 0.83
U2AF1-202ENST00000380276 NUDT17P0C025 328 aa20.21■□□□□ 0.83
U2AF1-202ENST00000380276 SRSF2Q01130 221 aaKnown RBP20.21■□□□□ 0.83
U2AF1-202ENST00000380276 SMU1Q2TAY7 513 aa20.21■□□□□ 0.83
U2AF1-202ENST00000380276 FAM166AQ6J272 317 aa20.21■□□□□ 0.83
U2AF1-202ENST00000380276 ZNF781Q8N8C0 355 aa20.21■□□□□ 0.83
U2AF1-202ENST00000380276 WDR60Q8WVS4 1066 aa20.21■□□□□ 0.83
U2AF1-202ENST00000380276 NEURL3Q96EH8 262 aa20.21■□□□□ 0.83
U2AF1-202ENST00000380276 VRK1Q99986 396 aaPredicted RBP20.21■□□□□ 0.83
U2AF1-202ENST00000380276 LOC100289279A0A1B0GTE1 492 aa20.2■□□□□ 0.82
U2AF1-202ENST00000380276 ZC3H12DA2A288 527 aaKnown RBP20.2■□□□□ 0.82
U2AF1-202ENST00000380276 ZNF208O43345 1280 aa20.2■□□□□ 0.82
U2AF1-202ENST00000380276 ITM2AO43736 263 aa20.2■□□□□ 0.82
U2AF1-202ENST00000380276 SCN2BO60939 215 aa20.2■□□□□ 0.82
U2AF1-202ENST00000380276 GUSBP08236 651 aa20.2■□□□□ 0.82
U2AF1-202ENST00000380276 UQCRBP14927 111 aa20.2■□□□□ 0.82
U2AF1-202ENST00000380276 CREB1P16220 341 aa20.2■□□□□ 0.82
U2AF1-202ENST00000380276 IGFBP5P24593 272 aa20.2■□□□□ 0.82
U2AF1-202ENST00000380276 MPGP29372 298 aa20.2■□□□□ 0.82
U2AF1-202ENST00000380276 SNRPD2P62316 118 aaKnown RBP20.2■□□□□ 0.82
U2AF1-202ENST00000380276 PLAURQ03405 335 aa20.2■□□□□ 0.82
U2AF1-202ENST00000380276 SLC17A1Q14916 467 aa20.2■□□□□ 0.82
U2AF1-202ENST00000380276 SYPL1Q16563 259 aa20.2■□□□□ 0.82
U2AF1-202ENST00000380276 IQCCQ4KMZ1 466 aa20.2■□□□□ 0.82
U2AF1-202ENST00000380276 HIKESHIQ53FT3 197 aa20.2■□□□□ 0.82
U2AF1-202ENST00000380276 SPANXN4Q5MJ08 99 aa20.2■□□□□ 0.82
U2AF1-202ENST00000380276 AAED1Q7RTV5 226 aa20.2■□□□□ 0.82
U2AF1-202ENST00000380276 GPAT4Q86UL3 456 aa20.2■□□□□ 0.82
U2AF1-202ENST00000380276 ANKFN1Q8N957 763 aa20.2■□□□□ 0.82
U2AF1-202ENST00000380276 LGALS13Q9UHV8 139 aa20.2■□□□□ 0.82
U2AF1-202ENST00000380276 YLPM1P49750 1951 aaKnown RBP20.19■□□□□ 0.82
U2AF1-202ENST00000380276 APEHP13798 732 aaKnown RBP20.19■□□□□ 0.82
U2AF1-202ENST00000380276 S100A3P33764 101 aa20.19■□□□□ 0.82
U2AF1-202ENST00000380276 NME5P56597 212 aa20.19■□□□□ 0.82
U2AF1-202ENST00000380276 H3F3AP84243 136 aa20.19■□□□□ 0.82
U2AF1-202ENST00000380276 CEACAM7Q14002 265 aa20.19■□□□□ 0.82
U2AF1-202ENST00000380276 GNA13Q14344 377 aa20.19■□□□□ 0.82
U2AF1-202ENST00000380276 OR7A5Q15622 319 aa20.19■□□□□ 0.82
U2AF1-202ENST00000380276 PAQR6Q6TCH4 344 aa20.19■□□□□ 0.82
U2AF1-202ENST00000380276 SLC46A3Q7Z3Q1 461 aa20.19■□□□□ 0.82
U2AF1-202ENST00000380276 RNF130Q86XS8 419 aa20.19■□□□□ 0.82
U2AF1-202ENST00000380276 AURKBQ96GD4 344 aaPredicted RBP20.19■□□□□ 0.82
U2AF1-202ENST00000380276 ZIM3Q96PE6 472 aa20.19■□□□□ 0.82
U2AF1-202ENST00000380276 SORCS2Q96PQ0 1159 aa20.19■□□□□ 0.82
U2AF1-202ENST00000380276 C19orf24Q9BVV8 132 aa20.19■□□□□ 0.82
U2AF1-202ENST00000380276 HEATR1Q9H583 2144 aaKnown RBP20.19■□□□□ 0.82
U2AF1-202ENST00000380276 PRAMEF27A3QJZ7 478 aa20.18■□□□□ 0.82
U2AF1-202ENST00000380276 HMGN4O00479 90 aa20.18■□□□□ 0.82
U2AF1-202ENST00000380276 AKR7A3O95154 331 aa20.18■□□□□ 0.82
U2AF1-202ENST00000380276 C1QCP02747 245 aa20.18■□□□□ 0.82
U2AF1-202ENST00000380276 MYZAPP0CAP1 466 aa20.18■□□□□ 0.82
U2AF1-202ENST00000380276 IL7RP16871 459 aa20.18■□□□□ 0.82
U2AF1-202ENST00000380276 HNF1AP20823 631 aa20.18■□□□□ 0.82
U2AF1-202ENST00000380276 ANXA11P50995 505 aaKnown RBP20.18■□□□□ 0.82
U2AF1-202ENST00000380276 CLNS1AP54105 237 aaKnown RBP20.18■□□□□ 0.82
U2AF1-202ENST00000380276 CHI3L2Q15782 390 aa20.18■□□□□ 0.82
U2AF1-202ENST00000380276 VHLLQ6RSH7 139 aa20.18■□□□□ 0.82
U2AF1-202ENST00000380276 SPATA19Q7Z5L4 167 aa20.18■□□□□ 0.82
U2AF1-202ENST00000380276 ABHD12BQ7Z5M8 362 aaPredicted RBP20.18■□□□□ 0.82
U2AF1-202ENST00000380276 CMIPQ8IY22 773 aa20.18■□□□□ 0.82
U2AF1-202ENST00000380276 TMEM99Q8N816 258 aa20.18■□□□□ 0.82
U2AF1-202ENST00000380276 ANKS4BQ8N8V4 417 aa20.18■□□□□ 0.82
U2AF1-202ENST00000380276 OR9K2Q8NGE7 335 aa20.18■□□□□ 0.82
U2AF1-202ENST00000380276 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.18■□□□□ 0.82
U2AF1-202ENST00000380276 PLCE1Q9P212 2302 aa20.18■□□□□ 0.82
U2AF1-202ENST00000380276 SLC35F4A4IF30 521 aa20.17■□□□□ 0.82
U2AF1-202ENST00000380276 CFAP73A6NFT4 308 aa20.17■□□□□ 0.82
U2AF1-202ENST00000380276 GPIP06744 558 aa20.17■□□□□ 0.82
U2AF1-202ENST00000380276 CHRM4P08173 479 aa20.17■□□□□ 0.82
U2AF1-202ENST00000380276 NR2F1P10589 423 aa20.17■□□□□ 0.82
U2AF1-202ENST00000380276 CXCR1P25024 350 aa20.17■□□□□ 0.82
U2AF1-202ENST00000380276 SLC1A3P43003 542 aa20.17■□□□□ 0.82
U2AF1-202ENST00000380276 NR4A2P43354 598 aa20.17■□□□□ 0.82
U2AF1-202ENST00000380276 UBE2NP61088 152 aaKnown RBP20.17■□□□□ 0.82
U2AF1-202ENST00000380276 ABCE1P61221 599 aaKnown RBP20.17■□□□□ 0.82
U2AF1-202ENST00000380276 CASP8Q14790 479 aa20.17■□□□□ 0.82
U2AF1-202ENST00000380276 FAM174BQ3ZCQ3 159 aa20.17■□□□□ 0.82
U2AF1-202ENST00000380276 MRPL2Q5T653 305 aaKnown RBP20.17■□□□□ 0.82
U2AF1-202ENST00000380276 POMGNT2Q8NAT1 580 aa20.17■□□□□ 0.82
U2AF1-202ENST00000380276 PNPT1Q8TCS8 783 aaKnown RBP20.17■□□□□ 0.82
U2AF1-202ENST00000380276 TMEM45BQ96B21 275 aa20.17■□□□□ 0.82
U2AF1-202ENST00000380276 TESCQ96BS2 214 aa20.17■□□□□ 0.82
U2AF1-202ENST00000380276 ZNF385AQ96PM9 386 aaKnown RBP20.17■□□□□ 0.82
U2AF1-202ENST00000380276 TAPBPLQ9BX59 468 aa20.17■□□□□ 0.82
U2AF1-202ENST00000380276 SLC38A1Q9H2H9 487 aa20.17■□□□□ 0.82
U2AF1-202ENST00000380276 ADPRHL2Q9NX46 363 aa20.17■□□□□ 0.82
U2AF1-202ENST00000380276 IGHV1-18A0A0C4DH31 117 aa20.16■□□□□ 0.82
U2AF1-202ENST00000380276 AGAP5A6NIR3 686 aa20.16■□□□□ 0.82
U2AF1-202ENST00000380276 E9PBE3 544 aa20.16■□□□□ 0.82
U2AF1-202ENST00000380276 NDUFS8O00217 210 aa20.16■□□□□ 0.82
U2AF1-202ENST00000380276 SERPINE1P05121 402 aa20.16■□□□□ 0.82
U2AF1-202ENST00000380276 C8BP07358 591 aa20.16■□□□□ 0.82
U2AF1-202ENST00000380276 EPS8Q12929 822 aa20.16■□□□□ 0.82
U2AF1-202ENST00000380276 DPY19L1Q2PZI1 675 aa20.16■□□□□ 0.82
U2AF1-202ENST00000380276 MST1LQ2TV78 715 aa20.16■□□□□ 0.82
U2AF1-202ENST00000380276 FAM120AOSQ5T036 256 aa20.16■□□□□ 0.82
U2AF1-202ENST00000380276 TMEM225Q6GV28 225 aa20.16■□□□□ 0.82
U2AF1-202ENST00000380276 CADM2Q8N3J6 435 aa20.16■□□□□ 0.82
U2AF1-202ENST00000380276 PIP4P2Q8N4L2 257 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms