RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 DMRTA2Q96SC8 542 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 SMAD5Q99717 465 aaKnown RBP13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 IFT27Q9BW83 186 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 TEX12Q9BXU0 123 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 ARL6Q9H0F7 186 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 ZNF275Q9NSD4 429 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 TBC1D29Q9UFV1 150 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 PCDHGA9Q9Y5G4 932 aaKnown RBP13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 TP53BP1Q12888 1972 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 CABIN1Q9Y6J0 2220 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 A0A0G2JK05 382 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 PRR19A6NJB7 356 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 LINC01387J3KSC0 135 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 SIGLEC6O43699 453 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 SIX6O95475 246 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 EML2O95834 649 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 SNRPBP14678 240 aaKnown RBP13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 CALCRP30988 508 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 RAD52P43351 418 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 GK2Q14410 553 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 HLA-BQ31612 363 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 RABEPKQ7Z6M1 372 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 TAF8Q7Z7C8 310 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 PAQR7Q86WK9 346 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 KRT78Q8N1N4 520 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 OR2I1PQ8NGU4 316 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 LMX1AQ8TE12 382 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 ZDHHC1Q8WTX9 485 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 ELF4Q99607 663 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 OR52A5Q9H2C5 316 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 AUNIPQ9H7T9 357 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 DMRT3Q9NQL9 472 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 MLXQ9UH92 298 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 TMEM131Q92545 1883 aa13.88□□□□□ -0.19
CCHCR1-201ENST00000376266 SPEGQ15772 3267 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 A0A087WUU8 490 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 A0A0B4J203 849 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 A0A1B0GUH1 482 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 SOCS6O14544 535 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 ARPC1BO15143 372 aaKnown RBP13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 HMGN1P05114 100 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 PPP3CBP16298 524 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 IMPA1P29218 277 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 HTR1FP30939 366 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 SEC61A1P61619 476 aaKnown RBP13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 HNRNPKP61978 463 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 BDH1Q02338 343 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 HSPB3Q12988 150 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 IGSF11Q5DX21 431 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 PABPC1L2AQ5JQF8 200 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 OLIG3Q7RTU3 272 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 SZRD1Q7Z422 152 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 IZUMO1Q8IYV9 350 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 SPICQ8N5J4 248 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 EIF4E3Q8N5X7 224 aaKnown RBP13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 SIRT6Q8N6T7 355 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 FAM71CQ8NEG0 241 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 OR5W2Q8NH69 310 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 XAGE5Q8WWM1 108 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 FAM46AQ96IP4 442 aaKnown RBP13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 LCORQ96JN0 433 aaPredicted RBP13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 ALG8Q9BVK2 526 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 IL21RQ9HBE5 538 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 ACTR10Q9NZ32 417 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 ADAMTS9Q9P2N4 1935 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 PCDHGA5Q9Y5G8 931 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 MPTX1A8MV57 137 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 F8W036 122 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 FOXE1O00358 373 aaPredicted RBP13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 SURF4O15260 269 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 NR2F1P10589 423 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 GABRA1P14867 456 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 IFNGR2P38484 337 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 BUD31P41223 144 aaPredicted RBP13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 CCR8P51685 355 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 MEF2AQ02078 507 aaPredicted RBP13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 SLC3A1Q07837 685 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 SHBQ15464 509 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 SFTPA2Q8IWL1 248 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 OR4D9Q8NGE8 314 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 OR56A3Q8NH54 315 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 WDR89Q96FK6 387 aaPredicted RBP13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 PRRC1Q96M27 445 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 TMPRSS13Q9BYE2 586 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 SLC39A1Q9NY26 324 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 NTMQ9P121 344 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 ICKQ9UPZ9 632 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 CAMK2AQ9UQM7 478 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 RCE1Q9Y256 329 aa13.87□□□□□ -0.19
CCHCR1-201ENST00000376266 GALR3O60755 368 aaPredicted RBP13.86□□□□□ -0.19
CCHCR1-201ENST00000376266 PIAS2O75928 621 aa13.86□□□□□ -0.19
CCHCR1-201ENST00000376266 CATP04040 527 aaKnown RBP13.86□□□□□ -0.19
CCHCR1-201ENST00000376266 RAB3BP20337 219 aa13.86□□□□□ -0.19
CCHCR1-201ENST00000376266 TBXA2RP21731 343 aa13.86□□□□□ -0.19
CCHCR1-201ENST00000376266 CCR9P51686 369 aa13.86□□□□□ -0.19
CCHCR1-201ENST00000376266 ARHGDIBP52566 201 aa13.86□□□□□ -0.19
CCHCR1-201ENST00000376266 PNLIPRP1P54315 467 aa13.86□□□□□ -0.19
CCHCR1-201ENST00000376266 E2F1Q01094 437 aa13.86□□□□□ -0.19
CCHCR1-201ENST00000376266 TSPAN31Q12999 210 aa13.86□□□□□ -0.19
CCHCR1-201ENST00000376266 ELOCQ15369 112 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms