RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 BLOC1S1P78537 153 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 CBFBQ13951 182 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 SIRT6Q8N6T7 355 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 PITX2Q99697 317 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 TMEM72A0PK05 275 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 ZNF736B4DX44 427 aaPredicted RBP6.07□□□□□ -1.44
SMC1A-202ENST00000375340 SYT7O43581 403 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 PRSS23O95084 383 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 RAB3DO95716 219 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 MAOAP21397 527 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 PRSS3P35030 304 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 MRPL19P49406 292 aaKnown RBP6.07□□□□□ -1.44
SMC1A-202ENST00000375340 SLC25A35Q3KQZ1 300 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 OR2T4Q8NH00 348 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 SLC35A4Q96G79 324 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 MFFQ9GZY8 342 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 ALKBH4Q9NXW9 302 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 VDAC3Q9Y277 283 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 PRKXP51817 358 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 ZNF616Q08AN1 781 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 MRPL58Q14197 206 aaKnown RBP6.07□□□□□ -1.44
SMC1A-202ENST00000375340 NSDHLQ15738 373 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 ADAMTSL4Q6UY14 1074 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 SLC16A11Q8NCK7 471 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 OR5H2Q8NGV7 314 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 ZNF285Q96NJ3 590 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 SEMA4CQ9C0C4 833 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 FBXL2Q9UKC9 423 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 ZNF850A8MQ14 1090 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 HLA-AP01891 365 aaKnown RBP6.07□□□□□ -1.44
SMC1A-202ENST00000375340 HTR4Q13639 388 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 AGERQ15109 404 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 HEPHL1Q6MZM0 1159 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 USP53Q70EK8 1073 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 ADIPOR2Q86V24 386 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 TANKQ92844 425 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 DDIT4LQ96D03 193 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 PGAM5Q96HS1 289 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 CNTNAP3BQ96NU0 1288 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 ZDHHC5Q9C0B5 715 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 SRRQ9GZT4 340 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 HHATLQ9HCP6 504 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 B3GAT2Q9NPZ5 323 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 A0A1W2PR48 441 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 FPR3P25089 353 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 CCR2P41597 374 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 UBE2MP61081 183 aaKnown RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 DEFB133Q30KQ1 61 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 KCTD18Q6PI47 426 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 TMEM64Q6YI46 380 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 TOR1AIP2Q8NFQ8 470 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 FAM174AQ8TBP5 190 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 FAM71F1Q96KD3 344 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 ELOVL3Q9HB03 270 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 PLCXD1Q9NUJ7 323 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 LOC285556D6RIA3 1793 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 ANKRD61A6NGH8 418 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 LGI1O95970 557 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 GABRR1P24046 479 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 IRS1P35568 1242 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 KIR2DL3P43628 341 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 CRMP1Q14194 572 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 SSX1Q16384 188 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 TMEM225Q6GV28 225 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 RPL22L1Q6P5R6 122 aaKnown RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 MAMDC2Q7Z304 686 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 VN1R2Q8NFZ6 395 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 PITHD1Q9GZP4 211 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 C2orf42Q9NWW7 574 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 VSX1Q9NZR4 365 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 ADAM29Q9UKF5 820 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 PHYHO14832 338 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 SRMP19623 302 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 PKLRP30613 574 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 RBMXP38159 391 aaKnown RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 DHPSP49366 369 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 PRDX1Q06830 199 aaKnown RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 OPCMLQ14982 345 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 SLC48A1Q6P1K1 146 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 OR6N1Q8NGY5 312 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 KIAA1143Q96AT1 154 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 TPSD1Q9BZJ3 242 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 TESQ9UGI8 421 aaKnown RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 SLC23A1Q9UHI7 598 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 MUTYHQ9UIF7 546 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 RPH3AQ9Y2J0 694 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 NAP1L6A6NFF2 107 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 LGALS8O00214 317 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 PGCP20142 388 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 MAKP20794 623 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 PRPH2P23942 346 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 HTR2AP28223 471 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 BSGP35613 385 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 CRYBB2P43320 205 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 FXYD4P59646 89 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 SIRPAP78324 504 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 CCINQ13939 588 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 YOD1Q5VVQ6 348 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-202ENST00000375340 TPRA1Q86W33 373 aa6.06□□□□□ -1.44
SMC1A-202ENST00000375340 PM20D2Q8IYS1 436 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms