RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 AIPO00170 330 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 PEX12O00623 359 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 PDCD5O14737 125 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 SULT1B1O43704 296 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 SUSD5O60279 629 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 IL5P05113 134 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 ANXA7P20073 488 aaKnown RBP19.47■□□□□ 0.71
UPF3A-202ENST00000375299 SLC6A6P31641 620 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 DCST2Q5T1A1 773 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 FCRLAQ7L513 359 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 SERPINA12Q8IW75 414 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 SNX33Q8WV41 574 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 HMGB4Q8WW32 186 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 PHYHIPQ92561 330 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 TNFRSF13CQ96RJ3 184 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 DPYSL5Q9BPU6 564 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 UTP23Q9BRU9 249 aaKnown RBP19.47■□□□□ 0.71
UPF3A-202ENST00000375299 PRSS16Q9NQE7 514 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 ZC4H2Q9NQZ6 224 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 PFDN2Q9UHV9 154 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 GNG8Q9UK08 70 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 ICAM5Q9UMF0 924 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 PIN1P1O15428 100 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 TIMP1P01033 207 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 IL32P24001 234 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 PTH2RP49190 550 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 TNFRSF17Q02223 184 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 HLXQ14774 488 aaPredicted RBP19.46■□□□□ 0.71
UPF3A-202ENST00000375299 SFRP5Q5T4F7 317 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 SLC35F2Q8IXU6 374 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 POMGNT2Q8NAT1 580 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 SCARB1Q8WTV0 552 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 ORAI1Q96D31 301 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 SLC25A18Q9H1K4 315 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 CCDC86Q9H6F5 360 aaKnown RBP19.46■□□□□ 0.71
UPF3A-202ENST00000375299 SPHK1Q9NYA1 384 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 KCNK6Q9Y257 313 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 SNRPGP15A8MWD9 76 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 A8MXK9 166 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 TOR1AO14656 332 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 IFNA16P05015 189 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 NAA10P41227 235 aaPredicted RBP19.46■□□□□ 0.71
UPF3A-202ENST00000375299 KCT2Q8NC54 265 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 SDR9C7Q8NEX9 313 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 OR52E2Q8NGJ4 325 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 COQ8AQ8NI60 647 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 GRHL3Q8TE85 626 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 CNOT9Q92600 299 aaKnown RBP19.46■□□□□ 0.71
UPF3A-202ENST00000375299 TRIM43Q96BQ3 446 aaPredicted RBP19.46■□□□□ 0.71
UPF3A-202ENST00000375299 WDR89Q96FK6 387 aaPredicted RBP19.46■□□□□ 0.71
UPF3A-202ENST00000375299 POT1Q9NUX5 634 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 FBXO34Q9NWN3 711 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 TAS2R10Q9NYW0 307 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 RWDD3Q9Y3V2 267 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 OR1A2Q9Y585 309 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 PCDHGA5Q9Y5G8 931 aa19.46■□□□□ 0.71
UPF3A-202ENST00000375299 RP2O75695 350 aa19.45■□□□□ 0.7
UPF3A-202ENST00000375299 S100A11P31949 105 aa19.45■□□□□ 0.7
UPF3A-202ENST00000375299 MECP2P51608 486 aaKnown RBP19.45■□□□□ 0.7
UPF3A-202ENST00000375299 PPP2CBP62714 309 aa19.45■□□□□ 0.7
UPF3A-202ENST00000375299 PPP2CAP67775 309 aa19.45■□□□□ 0.7
UPF3A-202ENST00000375299 GGTLC2Q14390 218 aa19.45■□□□□ 0.7
UPF3A-202ENST00000375299 FAAP20Q6NZ36 180 aa19.45■□□□□ 0.7
UPF3A-202ENST00000375299 OR4N5Q8IXE1 308 aa19.45■□□□□ 0.7
UPF3A-202ENST00000375299 OR4K14Q8NGD5 310 aa19.45■□□□□ 0.7
UPF3A-202ENST00000375299 GAL3ST3Q96A11 431 aa19.45■□□□□ 0.7
UPF3A-202ENST00000375299 ARSGQ96EG1 525 aa19.45■□□□□ 0.7
UPF3A-202ENST00000375299 MCCC2Q9HCC0 563 aa19.45■□□□□ 0.7
UPF3A-202ENST00000375299 GLS2Q9UI32 602 aa19.45■□□□□ 0.7
UPF3A-202ENST00000375299 FOXJ3Q9UPW0 622 aa19.45■□□□□ 0.7
UPF3A-202ENST00000375299 TRPM6Q9BX84 2022 aa19.45■□□□□ 0.7
UPF3A-202ENST00000375299 SLC22A23A1A5C7 686 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 OR52A4PA6NMU1 304 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 GPRIN2O60269 458 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 LPLP06858 475 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 CMPK1P30085 196 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 PSMB10P40306 273 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 KIAA1024LP59773 190 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 MRPS10P82664 201 aaKnown RBP19.44■□□□□ 0.7
UPF3A-202ENST00000375299 ZNF273Q14593 569 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 B3GNTL1Q67FW5 361 aaPredicted RBP19.44■□□□□ 0.7
UPF3A-202ENST00000375299 ZNF613Q6PF04 617 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 ALKAL2Q6UX46 152 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 TFAP2EQ6VUC0 442 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 NHLRC1Q6VVB1 395 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 GRASPQ7Z6J2 395 aaPredicted RBP19.44■□□□□ 0.7
UPF3A-202ENST00000375299 SAMD14Q8IZD0 417 aaPredicted RBP19.44■□□□□ 0.7
UPF3A-202ENST00000375299 RAB7BQ96AH8 199 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 TEX101Q9BY14 249 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 C1QTNF3-AMACRE9PGA6 284 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 ADH1CP00326 375 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 ZNF888P0CJ79 500 aaPredicted RBP19.44■□□□□ 0.7
UPF3A-202ENST00000375299 CEBPBP17676 345 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 P2RX1P51575 399 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 SEC61A1P61619 476 aaKnown RBP19.44■□□□□ 0.7
UPF3A-202ENST00000375299 ZNF234Q14588 700 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 TMEM69Q5SWH9 247 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 ZNF425Q6IV72 752 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 DGLUCYQ7Z3D6 616 aa19.44■□□□□ 0.7
UPF3A-202ENST00000375299 OR51L1Q8NGJ5 315 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms