RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 STUB1Q9UNE7 303 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 SIRT4Q9Y6E7 314 aaPredicted RBP9.94□□□□□ -0.82
CXCL12-203ENST00000374429 DCHS1Q96JQ0 3298 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 KIR2DS5A0A0G2JLQ3 304 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 A0A0G2JNG1 304 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 SMLR1H3BR10 107 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 KIR2DS3K7RE56 304 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 SCDO00767 359 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 ZNF749O43361 778 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 MBTPS2O43462 519 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 NGFRP08138 427 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 TRA2BP62995 288 aaKnown RBP9.94□□□□□ -0.82
CXCL12-203ENST00000374429 KIR2DS5Q14953 304 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 NXNL2Q5VZ03 156 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 LEG1Q6P5S2 330 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 ZNF620Q6ZNG0 422 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 NANOGP1Q8N7R0 232 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 C17orf47Q8NEP4 570 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 SEMA6CQ9H3T2 930 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 AKIRIN1Q9H9L7 192 aaPredicted RBP9.94□□□□□ -0.82
CXCL12-203ENST00000374429 KRCC1Q9NPI7 259 aaPredicted RBP9.94□□□□□ -0.82
CXCL12-203ENST00000374429 FGF21Q9NSA1 209 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 SCML1Q9UN30 329 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 RPH3AQ9Y2J0 694 aaPredicted RBP9.94□□□□□ -0.82
CXCL12-203ENST00000374429 RNF215Q9Y6U7 377 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 TEX13CA0A0J9YWL9 993 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 FOXS1O43638 330 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 UPK1BO75841 260 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 LIMS1P48059 325 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 CD226Q15762 336 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 FBXO43Q4G163 708 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 ZNF628Q5EBL2 1059 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 MBOAT2Q6ZWT7 520 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 SSX6Q7RTT6 188 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 OR2L13Q8N349 312 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 DUSP19Q8WTR2 217 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 APOBEC4Q8WW27 367 aaKnown RBP9.94□□□□□ -0.82
CXCL12-203ENST00000374429 NKD1Q969G9 470 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 NECAB3Q96P71 396 aaPredicted RBP9.94□□□□□ -0.82
CXCL12-203ENST00000374429 USB1Q9BQ65 265 aaKnown RBP9.94□□□□□ -0.82
CXCL12-203ENST00000374429 NANSQ9NR45 359 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 CUTCQ9NTM9 273 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 ZSCAN32Q9NX65 697 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 OSGIN1Q9UJX0 560 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 KCND3Q9UK17 655 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 CBLCQ9ULV8 474 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 PEX16Q9Y5Y5 336 aa9.94□□□□□ -0.82
CXCL12-203ENST00000374429 TICRRQ7Z2Z1 1910 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 CDHR4A6H8M9 788 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 MEIS3P1A6NDR6 274 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 ERVH48-1M5A8F1 160 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 SLC25A12O75746 678 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 HIST1H2ABP04908 130 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 SCG5P05408 212 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 ZGLP1P0C6A0 271 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 FOSL2P15408 326 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 EDNRAP25101 427 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 ARRB1P49407 418 aaPredicted RBP9.93□□□□□ -0.82
CXCL12-203ENST00000374429 ZNF136P52737 540 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 CTXN1P60606 82 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 YPEL5P62699 121 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 HES5Q5TA89 166 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 HIST3H2AQ7L7L0 130 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 GPAT4Q86UL3 456 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 LURAP1LQ8IV03 231 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 BEST4Q8NFU0 473 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 OR6N2Q8NGY6 317 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 GPBAR1Q8TDU6 330 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 HIST1H2ACQ93077 130 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 NT5DC2Q9H857 520 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 GALNT9Q9HCQ5 603 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 MKKSQ9NPJ1 570 aaPredicted RBP9.93□□□□□ -0.82
CXCL12-203ENST00000374429 NBEAQ8NFP9 2946 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 DSPP15924 2871 aaKnown RBP9.93□□□□□ -0.82
CXCL12-203ENST00000374429 SOX1O00570 391 aaPredicted RBP9.93□□□□□ -0.82
CXCL12-203ENST00000374429 WISP1O95388 367 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 ZNF3P17036 446 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 CASP3P42574 277 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 GRK6P43250 576 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 FNTBP49356 437 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 SRP9P49458 86 aaKnown RBP9.93□□□□□ -0.82
CXCL12-203ENST00000374429 OR2B6P58173 313 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 IRF3Q14653 427 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 EIPR1Q53HC9 387 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 CNIH2Q6PI25 160 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 GDPD3Q7L5L3 318 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 PRSS45Q7RTY3 260 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 DNAAF1Q8NEP3 725 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 OR5J2Q8NH18 312 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 ASB12Q8WXK4 309 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 POLDIP3Q9BY77 421 aaKnown RBP9.93□□□□□ -0.82
CXCL12-203ENST00000374429 FAM240BA0A1B0GVZ2 78 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 I3L521 148 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 GABRPO00591 440 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 SURF4O15260 269 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 CRYBB2P43320 205 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 HNRNPKP61978 463 aaKnown RBP eCLIP9.93□□□□□ -0.82
CXCL12-203ENST00000374429 MELKQ14680 651 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 CDK10Q15131 360 aa9.93□□□□□ -0.82
CXCL12-203ENST00000374429 INPP5JQ15735 1006 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms