RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 FLRT3Q9NZU0 649 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 TNFRSF10DQ9UBN6 386 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 B3GALT1Q9Y5Z6 326 aa12.9□□□□□ -0.35
LDB3-204ENST00000372066 MYO18BQ8IUG5 2567 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 SERINC4A6NH21 518 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 PRR23D1E9PI22 279 aaPredicted RBP12.89□□□□□ -0.35
LDB3-204ENST00000372066 OR2B3O76000 313 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 IFNGP01579 166 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 PRR23D2P0DMB1 279 aaPredicted RBP12.89□□□□□ -0.35
LDB3-204ENST00000372066 MAOAP21397 527 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 ATP6V1E1P36543 226 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 RFX3P48380 749 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 BCAP31P51572 246 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 BTG2P78543 158 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 POU4F2Q12837 409 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 SQSTM1Q13501 440 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 GPR50Q13585 617 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 RTL4Q6ZR62 310 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 PRSS42Q7Z5A4 293 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 CCDC190Q86UF4 302 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 BCORP1Q8N888 145 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 ART5Q96L15 291 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 KCTD7Q96MP8 289 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 CCDC32Q9BV29 185 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 SPRTNQ9H040 489 aaPredicted RBP12.89□□□□□ -0.35
LDB3-204ENST00000372066 ATP13A2Q9NQ11 1180 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 MEPEQ9NQ76 525 aaPredicted RBP12.89□□□□□ -0.35
LDB3-204ENST00000372066 EXOSC3Q9NQT5 275 aaKnown RBP12.89□□□□□ -0.35
LDB3-204ENST00000372066 LANCL2Q9NS86 450 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 ASB6Q9NWX5 421 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 ERVK13-1Q9NX77 482 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 CARD8Q9Y2G2 431 aa12.89□□□□□ -0.35
LDB3-204ENST00000372066 SF3B6Q9Y3B4 125 aaKnown RBP12.89□□□□□ -0.35
LDB3-204ENST00000372066 TRDV1A0A1B0GX56 115 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 FUOMA2VDF0 154 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 H3BMH7 237 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 J3QRE1 110 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 PTP4A3O75365 173 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 CDC123O75794 336 aaPredicted RBP12.88□□□□□ -0.35
LDB3-204ENST00000372066 CSTAP01040 98 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 ZNF3P17036 446 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 HK1P19367 917 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 PPICP45877 212 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 PGDP52209 483 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 DCAF7P61962 342 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 CDC20Q12834 499 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 DCAF12Q5T6F0 453 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 OR2G6Q5TZ20 316 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 TMEM71Q6P5X7 295 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 D2HGDHQ8N465 521 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 ACBD7Q8N6N7 88 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 FAM71CQ8NEG0 241 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 OR4N2Q8NGD1 307 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 OR13C2Q8NGS9 318 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 GRHL3Q8TE85 626 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 TM9SF4Q92544 642 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 AP3S1Q92572 193 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 SLC25A46Q96AG3 418 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 DDA1Q9BW61 102 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 IFT27Q9BW83 186 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 OCIAD1Q9NX40 245 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 ICAM5Q9UMF0 924 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 TRAPPC4Q9Y296 219 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 DTX4Q9Y2E6 619 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 SPTA1P02549 2419 aa12.88□□□□□ -0.35
LDB3-204ENST00000372066 SLC35F4A4IF30 521 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 A8MU76 341 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 C17orf105B2RV13 164 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 PTTG1O95997 202 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 CLPSP04118 112 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 HLA-DPB1P04440 258 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 PEPDP12955 493 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 LIFP15018 202 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 CD53P19397 219 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 CSF2RBP32927 897 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 RORAP35398 523 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 RPS19P39019 145 aaKnown RBP12.87□□□□□ -0.35
LDB3-204ENST00000372066 ACTC1P68032 377 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 ACTA1P68133 377 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 PSPHP78330 225 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 IFITM3Q01628 133 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 SNAP47Q5SQN1 464 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 OAFQ86UD1 273 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 LYSMD2Q8IV50 215 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 GPR135Q8IZ08 494 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 PARP16Q8N5Y8 322 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 SGTBQ96EQ0 304 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 SLC41A2Q96JW4 573 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 PTCHD1Q96NR3 888 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 SECISBP2Q96T21 854 aaKnown RBP12.87□□□□□ -0.35
LDB3-204ENST00000372066 SLC30A2Q9BRI3 323 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 HAO2Q9NYQ3 351 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 KLHL21Q9UJP4 597 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 POLHQ9Y253 713 aa12.87□□□□□ -0.35
LDB3-204ENST00000372066 A0A087WUJ7 227 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 IGKV3D-11A0A0A0MRZ8 115 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 FRG2CA6NGY1 282 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 B4E171 279 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 HRKO00198 91 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 SOCS6O14544 535 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms