RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 GTF2E2P29084 291 aaKnown RBP13.26□□□□□ -0.29
COL9A1-204ENST00000370496 ASCL1P50553 236 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 CDH12P55289 794 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 TAS2R41P59536 307 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 SLC35A1P78382 337 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 OR7A5Q15622 319 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 IFI44LQ53G44 452 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 GTF2IRD2BQ6EKJ0 949 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 GLYATQ6IB77 296 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 FKBP9P1Q75LS8 142 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 CBLL1Q75N03 491 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 VTCN1Q7Z7D3 282 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 GTF2IRD2Q86UP8 949 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 ARHGAP24Q8N264 748 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 STK35Q8TDR2 534 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 LRRC46Q96FV0 321 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 POTEKPQ9BYX7 375 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 PCDHAC1Q9H158 963 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 GLRX2Q9NS18 164 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 KLHL9Q9P2J3 617 aa13.26□□□□□ -0.29
COL9A1-204ENST00000370496 PRPF19Q9UMS4 504 aaKnown RBP13.26□□□□□ -0.29
COL9A1-204ENST00000370496 SAMD4AQ9UPU9 718 aaKnown RBP13.26□□□□□ -0.29
COL9A1-204ENST00000370496 TRAPPC13A5PLN9 417 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 ARPC2O15144 300 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 TNFSF13O75888 250 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 PDE5AO76074 875 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 IMPDH2P12268 514 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 CEACAM7Q14002 265 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 DNAL1Q4LDG9 190 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 EEF1A1P5Q5VTE0 462 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 VWA1Q6PCB0 445 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 C5orf46Q6UWT4 87 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 FAM214BQ7L5A3 538 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 LUZP2Q86TE4 346 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 SLC43A2Q8N370 569 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 PIGXQ8TBF5 258 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 SLC38A4Q969I6 547 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 NSMCE2Q96MF7 247 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 EPYCQ99645 322 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 POLR2J2Q9GZM3 115 aaKnown RBP13.25□□□□□ -0.29
COL9A1-204ENST00000370496 POLR2J3Q9H1A7 115 aaKnown RBP13.25□□□□□ -0.29
COL9A1-204ENST00000370496 C1orf21Q9H246 121 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 PIGMQ9H3S5 423 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 C6orf203Q9P0P8 240 aaPredicted RBP13.25□□□□□ -0.29
COL9A1-204ENST00000370496 KLHL13Q9P2N7 655 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 CD300AQ9UGN4 299 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 SLC7A7Q9UM01 511 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 TRAPPC4Q9Y296 219 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 V9GYQ6 96 aa13.25□□□□□ -0.29
COL9A1-204ENST00000370496 USP9YO00507 2555 aaPredicted RBP13.25□□□□□ -0.29
COL9A1-204ENST00000370496 A0A087WUJ7 227 aa13.24□□□□□ -0.29
COL9A1-204ENST00000370496 EIF1BO60739 113 aaKnown RBP13.24□□□□□ -0.29
COL9A1-204ENST00000370496 CYTIPO60759 359 aa13.24□□□□□ -0.29
COL9A1-204ENST00000370496 PRKD3O94806 890 aa13.24□□□□□ -0.29
COL9A1-204ENST00000370496 KLK2P20151 261 aa13.24□□□□□ -0.29
COL9A1-204ENST00000370496 FPR1P21462 350 aa13.24□□□□□ -0.29
COL9A1-204ENST00000370496 AGTR1P30556 359 aa13.24□□□□□ -0.29
COL9A1-204ENST00000370496 IFNA8P32881 189 aa13.24□□□□□ -0.29
COL9A1-204ENST00000370496 MSX2P35548 267 aaPredicted RBP13.24□□□□□ -0.29
COL9A1-204ENST00000370496 RPS5P46782 204 aaKnown RBP13.24□□□□□ -0.29
COL9A1-204ENST00000370496 RASGEF1BQ0VAM2 473 aa13.24□□□□□ -0.29
COL9A1-204ENST00000370496 FXNQ16595 210 aa13.24□□□□□ -0.29
COL9A1-204ENST00000370496 TMEM201Q5SNT2 666 aa13.24□□□□□ -0.29
COL9A1-204ENST00000370496 ABLIM2Q6H8Q1 611 aa13.24□□□□□ -0.29
COL9A1-204ENST00000370496 P3H2Q8IVL5 708 aa13.24□□□□□ -0.29
COL9A1-204ENST00000370496 OR6K3Q8NGY3 331 aa13.24□□□□□ -0.29
COL9A1-204ENST00000370496 CCDC124Q96CT7 223 aaKnown RBP13.24□□□□□ -0.29
COL9A1-204ENST00000370496 SLC41A3Q96GZ6 507 aa13.24□□□□□ -0.29
COL9A1-204ENST00000370496 PRRC1Q96M27 445 aa13.24□□□□□ -0.29
COL9A1-204ENST00000370496 TACO1Q9BSH4 297 aaKnown RBP13.24□□□□□ -0.29
COL9A1-204ENST00000370496 NAA11Q9BSU3 229 aaPredicted RBP13.24□□□□□ -0.29
COL9A1-204ENST00000370496 CHST11Q9NPF2 352 aa13.24□□□□□ -0.29
COL9A1-204ENST00000370496 EMC3Q9P0I2 261 aa13.24□□□□□ -0.29
COL9A1-204ENST00000370496 PROCRQ9UNN8 238 aa13.24□□□□□ -0.29
COL9A1-204ENST00000370496 ICE1Q9Y2F5 2266 aa13.24□□□□□ -0.29
COL9A1-204ENST00000370496 IGKV1D-42A0A075B6H8 117 aa13.23□□□□□ -0.29
COL9A1-204ENST00000370496 TRAV36DV7A0A075B6V5 113 aa13.23□□□□□ -0.29
COL9A1-204ENST00000370496 LIPT2A6NK58 231 aa13.23□□□□□ -0.29
COL9A1-204ENST00000370496 GYG2O15488 501 aa13.23□□□□□ -0.29
COL9A1-204ENST00000370496 NPIPB7O75200 414 aa13.23□□□□□ -0.29
COL9A1-204ENST00000370496 OR5F1O95221 314 aa13.23□□□□□ -0.29
COL9A1-204ENST00000370496 STAMBPO95630 424 aa13.23□□□□□ -0.29
COL9A1-204ENST00000370496 GRNP28799 593 aaKnown RBP13.23□□□□□ -0.29
COL9A1-204ENST00000370496 UQCRC1P31930 480 aa13.23□□□□□ -0.29
COL9A1-204ENST00000370496 KIR2DL2P43627 348 aaPredicted RBP13.23□□□□□ -0.29
COL9A1-204ENST00000370496 EGR4Q05215 589 aa13.23□□□□□ -0.29
COL9A1-204ENST00000370496 GUSBP1Q15486 140 aa13.23□□□□□ -0.29
COL9A1-204ENST00000370496 OTUD3Q5T2D3 398 aaPredicted RBP13.23□□□□□ -0.29
COL9A1-204ENST00000370496 FAM69AQ5T7M9 428 aa13.23□□□□□ -0.29
COL9A1-204ENST00000370496 TSPYL5Q86VY4 417 aaPredicted RBP13.23□□□□□ -0.29
COL9A1-204ENST00000370496 C10orf53Q8N6V4 93 aa13.23□□□□□ -0.29
COL9A1-204ENST00000370496 SLC25A36Q96CQ1 311 aa13.23□□□□□ -0.29
COL9A1-204ENST00000370496 KTI12Q96EK9 354 aaPredicted RBP13.23□□□□□ -0.29
COL9A1-204ENST00000370496 MPP4Q96JB8 637 aa13.23□□□□□ -0.29
COL9A1-204ENST00000370496 TMEM43Q9BTV4 400 aa13.23□□□□□ -0.29
COL9A1-204ENST00000370496 C12orf49Q9H741 205 aa13.23□□□□□ -0.29
COL9A1-204ENST00000370496 GORASP2Q9H8Y8 452 aa13.23□□□□□ -0.29
COL9A1-204ENST00000370496 GP6Q9HCN6 339 aa13.23□□□□□ -0.29
COL9A1-204ENST00000370496 DCAF13Q9NV06 445 aaKnown RBP13.23□□□□□ -0.29
COL9A1-204ENST00000370496 TAS2R1Q9NYW7 299 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms