RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 TMED7Q9Y3B3 224 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 TRBV4-1A0A0J9YWV2 114 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 OR2AT4A6NND4 320 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 LMO7DNF2Z398 122 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 FGF17O60258 216 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 SLC43A1O75387 559 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 CHRNB4P30926 498 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 LEXMQ3ZCV2 418 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 RNASE10Q5GAN6 216 aaKnown RBP10.73□□□□□ -0.69
SYNE1-204ENST00000367248 DCDC5Q6ZRR9 648 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 MOB3CQ70IA8 216 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 DPY19L4Q7Z388 723 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 LRRC20Q8TCA0 184 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 HES7Q9BYE0 225 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 MTCH2Q9Y6C9 303 aa10.73□□□□□ -0.69
SYNE1-204ENST00000367248 A0A1W2PR48 441 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 MT-CO3P00414 261 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 TEAD1P28347 426 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 FXYD4P59646 89 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 LRRC37A5PQ49AS3 106 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 PYHIN1Q6K0P9 492 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 SLC37A3Q8NCC5 494 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 B3GNT7Q8NFL0 401 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 HSD17B8Q92506 261 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 HHLA2Q9UM44 414 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 TRIOBPQ9H2D6 2365 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 LOC105369274A0A096LPK9 316 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 CRTAPO75718 401 aaPredicted RBP10.72□□□□□ -0.69
SYNE1-204ENST00000367248 POU2F2P09086 479 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 RAC2P15153 192 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 GLB1P16278 677 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 OR8B8Q15620 311 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 CDNFQ49AH0 187 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 COX20Q5RI15 118 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 UGT2A3Q6UWM9 527 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 OR4N4Q8N0Y3 316 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 INO80EQ8NBZ0 244 aaPredicted RBP10.72□□□□□ -0.69
SYNE1-204ENST00000367248 ZNF700Q9H0M5 742 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 FXYD6-FXYD2A0A087WZ82 144 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 GLSO94925 669 aaPredicted RBP10.72□□□□□ -0.69
SYNE1-204ENST00000367248 ITGAMP11215 1152 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 PSMB10P40306 273 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 EIF1P41567 113 aaKnown RBP10.72□□□□□ -0.69
SYNE1-204ENST00000367248 CXCR4P61073 352 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 ZNF91Q05481 1191 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 CMPK2Q5EBM0 449 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 MEPCEQ7L2J0 689 aaKnown RBP10.72□□□□□ -0.69
SYNE1-204ENST00000367248 KMT5CQ86Y97 462 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 Q8N402 240 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 MVB12AQ96EY5 273 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 FXYD6Q9H0Q3 95 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 PPT2Q9UMR5 302 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 ASXL3Q9C0F0 2248 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 ANKRD12Q6UB98 2062 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 PATE3B3GLJ2 98 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 TSPAN12O95859 305 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 IL2RAP01589 272 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 ENPP1P22413 925 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 AGFG1P52594 562 aaKnown RBP10.72□□□□□ -0.69
SYNE1-204ENST00000367248 PCBD1P61457 104 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 FAM217AQ8IXS0 508 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 KDM8Q8N371 416 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 SLC6A20Q9NP91 592 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 WDR37Q9Y2I8 494 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 TRAV36DV7A0A075B6V5 113 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 DLL1O00548 723 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 SLC35A1P78382 337 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 GAB1Q13480 694 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 UCN3Q969E3 161 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 ARSGQ96EG1 525 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 TNFRSF13CQ96RJ3 184 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 NUDT15Q9NV35 164 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 ENSAO43768 121 aaKnown RBP10.72□□□□□ -0.69
SYNE1-204ENST00000367248 CHMP24386 653 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 AQP2P41181 271 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 TMEM92Q6UXU6 159 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 BHLHE23Q8NDY6 225 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 NRG4Q8WWG1 115 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 PIGQQ9BRB3 760 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 C14orf119Q9NWQ9 140 aa10.72□□□□□ -0.69
SYNE1-204ENST00000367248 PAPPAQ13219 1627 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 IFNGR1P15260 489 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 ETV5P41161 510 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 B4GALNT1Q00973 533 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 SNTB2Q13425 540 aaKnown RBP10.71□□□□□ -0.69
SYNE1-204ENST00000367248 HES3Q5TGS1 186 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 COG8Q96MW5 612 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 KATNB1Q9BVA0 655 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 LHPPQ9H008 270 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 UCKL1Q9NWZ5 548 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 SERGEFQ9UGK8 458 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 TMEM269A0A1B0GVZ9 245 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 KANTRA0A1W2PQU2 76 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 TSPAN11A1L157 253 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 LILRA5A6NI73 299 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 STK17BO94768 372 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 DIRAS3O95661 229 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 PRSS36Q5K4E3 855 aa10.71□□□□□ -0.69
SYNE1-204ENST00000367248 CHDHQ8NE62 594 aaPredicted RBP10.71□□□□□ -0.69
SYNE1-204ENST00000367248 ABHD11Q8NFV4 315 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms