RNA–Protein interactions for RNA: ENST00000365287.1

RNU4-11P-201, Transcript of RNA, U4 small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4-11P, Length 132 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-11P-201ENST00000365287 SDHAF1A6NFY7 115 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 C4orf51C9J302 202 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 CASKO14936 926 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 BCAS1O75363 584 aaPredicted RBP-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 RHOBTB1O94844 696 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 SYNGR4O95473 234 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 HSPA4LO95757 839 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 PRPS2P11908 318 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 AKR1B1P15121 316 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 CXCR2P25025 360 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 DPP4P27487 766 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 CXCL12P48061 93 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 BIDP55957 195 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 REG3AQ06141 175 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 SCN1BQ07699 218 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 FUT5Q11128 374 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 NME3Q13232 169 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 PDIA5Q14554 519 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 ATP6AP1Q15904 470 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 LRIT3Q3SXY7 679 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 SCYL2Q6P3W7 929 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 SLC39A4Q6P5W5 647 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 FAM199XQ6PEV8 388 aaPredicted RBP-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 PAQR9Q6ZVX9 377 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 H2AFVQ71UI9 128 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 BNIPLQ7Z465 357 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 CCDC83Q8IWF9 413 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 OR13G1Q8NGZ3 307 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 WDR36Q8NI36 951 aaKnown RBP-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 CMTM2Q8TAZ6 248 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 CFAP36Q96G28 342 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 SDSLQ96GA7 329 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 ELMO2Q96JJ3 720 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 OR5B2Q96R09 309 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 TMEM246Q9BRR3 403 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 TBC1D10AQ9BXI6 508 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 CHMP4AQ9BY43 222 aa-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 POLR3FQ9H1D9 316 aaPredicted RBP-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 DNAJC17Q9NVM6 304 aaKnown RBP-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 CNOT2Q9NZN8 540 aaKnown RBP-0.35□□□□□ -2.47
RNU4-11P-201ENST00000365287 SH3TC1Q8TE82 1336 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 H0YHG0 523 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 FCN1O00602 326 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 XPO1O14980 1071 aaKnown RBP-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 GNA14O95837 355 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 CBR1P16152 277 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 CNR1P21554 472 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 CD80P33681 288 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 KRT83P78385 493 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 CCZ1BP86790 482 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 CCZ1P86791 482 aaPredicted RBP-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 FMODQ06828 376 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 TTLL9Q3SXZ7 439 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 TMEM52BQ4KMG9 183 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 AP1ARQ63HQ0 302 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 ADNP2Q6IQ32 1131 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 ZFP1Q6P2D0 407 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 TRAT1Q6PIZ9 186 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 ZNF571Q7Z3V5 609 aaPredicted RBP-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 VSTM4Q8IW00 320 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 LRRC43Q8N309 656 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 ARFGAP2Q8N6H7 521 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 OR1N2Q8NGR9 330 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 OR2G3Q8NGZ4 309 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 ZBED3Q96IU2 234 aaPredicted RBP-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 RNF145Q96MT1 663 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 NUDT16L1Q9BRJ7 211 aaKnown RBP-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 TXLNGYQ9BZA5 131 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 CRNKL1Q9BZJ0 848 aaKnown RBP-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 TRPV6Q9H1D0 765 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 TMEM206Q9H813 350 aa-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 FBXO6Q9NRD1 293 aaPredicted RBP-0.36□□□□□ -2.47
RNU4-11P-201ENST00000365287 ARID4BQ4LE39 1312 aaPredicted RBP-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 TMEM120BA0PK00 339 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 OR6C70A6NIJ9 312 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 OR6C65A6NJZ3 312 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 NME2P1O60361 137 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 IGHV3-43DP0DP04 118 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 FERP16591 822 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 XRCC1P18887 633 aaPredicted RBP-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 CCL11P51671 97 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 ATXN3P54252 364 aaPredicted RBP-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 PPIDQ08752 370 aaKnown RBP-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 LAGE3Q14657 143 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 CYTH1Q15438 398 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 ZSWIM7Q19AV6 140 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 ZNF181Q2M3W8 571 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 NSUN5P1Q3KNT7 163 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 TIGD3Q6B0B8 471 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 SLC30A6Q6NXT4 461 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 CBLN3Q6UW01 205 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 B3GLCTQ6Y288 498 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 CYS1Q717R9 158 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 KRTAP19-3Q7Z4W3 81 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 YRDCQ86U90 279 aaKnown RBP-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 LRRC75AQ8NAA5 344 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 CCDC191Q8NCU4 936 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 OR56B4Q8NH76 319 aa-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 BCL2L2Q92843 193 aaPredicted RBP-0.37□□□□□ -2.47
RNU4-11P-201ENST00000365287 AURKBQ96GD4 344 aaPredicted RBP-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms